Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST1H3AP68431 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
HIST1H3AP68431 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST1H3AP68431 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.15□□□□□ -0.14
HIST1H3AP68431 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.15□□□□□ -0.14
HIST1H3AP68431 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
HIST1H3AP68431 AP000347.1-202ENST00000435868 847 ntBASIC14.15□□□□□ -0.14
HIST1H3AP68431 ALG1L5P-201ENST00000482043 771 ntBASIC14.15□□□□□ -0.14
HIST1H3AP68431 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.15□□□□□ -0.14
HIST1H3AP68431 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC14.15□□□□□ -0.14
HIST1H3AP68431 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.15□□□□□ -0.14
HIST1H3AP68431 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC14.15□□□□□ -0.14
HIST1H3AP68431 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC14.15□□□□□ -0.14
HIST1H3AP68431 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST1H3AP68431 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
HIST1H3AP68431 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST1H3AP68431 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.15□□□□□ -0.14
HIST1H3AP68431 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.15□□□□□ -0.14
HIST1H3AP68431 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.15□□□□□ -0.14
HIST1H3AP68431 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
HIST1H3AP68431 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST1H3AP68431 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
HIST1H3AP68431 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
HIST1H3AP68431 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
HIST1H3AP68431 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.15□□□□□ -0.15
HIST1H3AP68431 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST1H3AP68431 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.14□□□□□ -0.15
HIST1H3AP68431 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST1H3AP68431 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST1H3AP68431 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST1H3AP68431 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST1H3AP68431 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
HIST1H3AP68431 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
HIST1H3AP68431 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST1H3AP68431 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST1H3AP68431 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST1H3AP68431 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST1H3AP68431 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST1H3AP68431 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST1H3AP68431 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HIST1H3AP68431 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST1H3AP68431 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.14□□□□□ -0.15
HIST1H3AP68431 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST1H3AP68431 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST1H3AP68431 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.14□□□□□ -0.15
HIST1H3AP68431 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST1H3AP68431 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.14□□□□□ -0.15
HIST1H3AP68431 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HIST1H3AP68431 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC14.14□□□□□ -0.15
HIST1H3AP68431 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC14.14□□□□□ -0.15
HIST1H3AP68431 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.14□□□□□ -0.15
HIST1H3AP68431 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC14.14□□□□□ -0.15
HIST1H3AP68431 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.14□□□□□ -0.15
HIST1H3AP68431 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.14□□□□□ -0.15
HIST1H3AP68431 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC14.14□□□□□ -0.15
HIST1H3AP68431 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
HIST1H3AP68431 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC14.14□□□□□ -0.15
HIST1H3AP68431 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
HIST1H3AP68431 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
HIST1H3AP68431 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST1H3AP68431 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.14□□□□□ -0.15
HIST1H3AP68431 AC105917.1-201ENST00000506637 2539 ntBASIC14.14□□□□□ -0.15
HIST1H3AP68431 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST1H3AP68431 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST1H3AP68431 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
HIST1H3AP68431 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST1H3AP68431 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
HIST1H3AP68431 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
HIST1H3AP68431 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST1H3AP68431 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
HIST1H3AP68431 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.14□□□□□ -0.15
HIST1H3AP68431 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST1H3AP68431 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HIST1H3AP68431 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.14□□□□□ -0.15
HIST1H3AP68431 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST1H3AP68431 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.14□□□□□ -0.15
HIST1H3AP68431 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.14□□□□□ -0.15
HIST1H3AP68431 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST1H3AP68431 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST1H3AP68431 ELL2P1-201ENST00000413990 1906 ntBASIC14.13□□□□□ -0.15
HIST1H3AP68431 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
HIST1H3AP68431 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HIST1H3AP68431 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HIST1H3AP68431 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.13□□□□□ -0.15
HIST1H3AP68431 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
HIST1H3AP68431 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HIST1H3AP68431 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
HIST1H3AP68431 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
HIST1H3AP68431 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.13□□□□□ -0.15
HIST1H3AP68431 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.13□□□□□ -0.15
HIST1H3AP68431 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.13□□□□□ -0.15
HIST1H3AP68431 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.13□□□□□ -0.15
HIST1H3AP68431 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC14.13□□□□□ -0.15
HIST1H3AP68431 YBX1P5-201ENST00000509441 847 ntBASIC14.13□□□□□ -0.15
HIST1H3AP68431 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC14.13□□□□□ -0.15
HIST1H3AP68431 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.13□□□□□ -0.15
HIST1H3AP68431 AC005829.1-201ENST00000570002 483 ntBASIC14.13□□□□□ -0.15
HIST1H3AP68431 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.13□□□□□ -0.15
HIST1H3AP68431 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC14.13□□□□□ -0.15
HIST1H3AP68431 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms