Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.78■□□□□ 0.12
YBX1P67809 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC15.78■□□□□ 0.12
YBX1P67809 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC15.78■□□□□ 0.12
YBX1P67809 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.78■□□□□ 0.12
YBX1P67809 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.78■□□□□ 0.12
YBX1P67809 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.78■□□□□ 0.12
YBX1P67809 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.78■□□□□ 0.12
YBX1P67809 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
YBX1P67809 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
YBX1P67809 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
YBX1P67809 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.78■□□□□ 0.12
YBX1P67809 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.78■□□□□ 0.12
YBX1P67809 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.78■□□□□ 0.12
YBX1P67809 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
YBX1P67809 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC15.78■□□□□ 0.12
YBX1P67809 AC084121.4-201ENST00000641598 221 ntBASIC15.78■□□□□ 0.12
YBX1P67809 AF228730.8-201ENST00000642140 221 ntBASIC15.78■□□□□ 0.12
YBX1P67809 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
YBX1P67809 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
YBX1P67809 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
YBX1P67809 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
YBX1P67809 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.78■□□□□ 0.12
YBX1P67809 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
YBX1P67809 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
YBX1P67809 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
YBX1P67809 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
YBX1P67809 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
YBX1P67809 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
YBX1P67809 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
YBX1P67809 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
YBX1P67809 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.78■□□□□ 0.12
YBX1P67809 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
YBX1P67809 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.77■□□□□ 0.12
YBX1P67809 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.77■□□□□ 0.12
YBX1P67809 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
YBX1P67809 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.77■□□□□ 0.12
YBX1P67809 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
YBX1P67809 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
YBX1P67809 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.77■□□□□ 0.12
YBX1P67809 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
YBX1P67809 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.77■□□□□ 0.12
YBX1P67809 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
YBX1P67809 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
YBX1P67809 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
YBX1P67809 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
YBX1P67809 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.77■□□□□ 0.12
YBX1P67809 AC105233.2-201ENST00000523697 349 ntBASIC15.77■□□□□ 0.12
YBX1P67809 AF228730.5-201ENST00000530288 346 ntBASIC15.77■□□□□ 0.12
YBX1P67809 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
YBX1P67809 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC15.77■□□□□ 0.12
YBX1P67809 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC15.77■□□□□ 0.12
YBX1P67809 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.77■□□□□ 0.12
YBX1P67809 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
YBX1P67809 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
YBX1P67809 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.77■□□□□ 0.11
YBX1P67809 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
YBX1P67809 AL589702.1-201ENST00000641229 1509 ntBASIC15.77■□□□□ 0.11
YBX1P67809 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.77■□□□□ 0.11
YBX1P67809 LINC02447-202ENST00000501888 2146 ntBASIC15.77■□□□□ 0.11
YBX1P67809 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
YBX1P67809 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
YBX1P67809 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
YBX1P67809 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
YBX1P67809 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.77■□□□□ 0.11
YBX1P67809 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
YBX1P67809 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
YBX1P67809 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
YBX1P67809 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
YBX1P67809 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
YBX1P67809 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.76■□□□□ 0.11
YBX1P67809 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.76■□□□□ 0.11
YBX1P67809 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.76■□□□□ 0.11
YBX1P67809 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.76■□□□□ 0.11
YBX1P67809 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
YBX1P67809 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
YBX1P67809 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
YBX1P67809 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
YBX1P67809 HR-201ENST00000312841 5351 ntTSL 5 BASIC15.76■□□□□ 0.11
YBX1P67809 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
YBX1P67809 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
YBX1P67809 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
YBX1P67809 KRT18P32-201ENST00000424695 1287 ntBASIC15.76■□□□□ 0.11
YBX1P67809 URGCP-206ENST00000446958 365 ntTSL 2 BASIC15.76■□□□□ 0.11
YBX1P67809 AC023141.5-201ENST00000458585 616 ntBASIC15.76■□□□□ 0.11
YBX1P67809 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC15.76■□□□□ 0.11
YBX1P67809 AC109322.1-201ENST00000524499 1264 ntBASIC15.76■□□□□ 0.11
YBX1P67809 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
YBX1P67809 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.76■□□□□ 0.11
YBX1P67809 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
YBX1P67809 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.76■□□□□ 0.11
YBX1P67809 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
YBX1P67809 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
YBX1P67809 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
YBX1P67809 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
YBX1P67809 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.76■□□□□ 0.11
YBX1P67809 PPT1-215ENST00000641471 2368 ntBASIC15.76■□□□□ 0.11
YBX1P67809 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC15.76■□□□□ 0.11
YBX1P67809 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
YBX1P67809 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
YBX1P67809 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms