Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
RPL39P62891 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
RPL39P62891 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
RPL39P62891 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
RPL39P62891 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
RPL39P62891 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC11.5□□□□□ -0.57
RPL39P62891 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
RPL39P62891 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC11.5□□□□□ -0.57
RPL39P62891 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC11.5□□□□□ -0.57
RPL39P62891 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
RPL39P62891 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
RPL39P62891 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
RPL39P62891 CDK2AP2P3-201ENST00000422476 372 ntBASIC11.5□□□□□ -0.57
RPL39P62891 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
RPL39P62891 RBSN-204ENST00000449050 903 ntTSL 2 BASIC11.5□□□□□ -0.57
RPL39P62891 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
RPL39P62891 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
RPL39P62891 LINC01238-205ENST00000567549 1107 ntBASIC11.5□□□□□ -0.57
RPL39P62891 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
RPL39P62891 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC11.5□□□□□ -0.57
RPL39P62891 PGM5P2-202ENST00000637225 1043 ntBASIC11.5□□□□□ -0.57
RPL39P62891 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC11.5□□□□□ -0.57
RPL39P62891 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC11.5□□□□□ -0.57
RPL39P62891 AC007686.3-201ENST00000619017 3487 ntBASIC11.5□□□□□ -0.57
RPL39P62891 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC11.5□□□□□ -0.57
RPL39P62891 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC11.5□□□□□ -0.57
RPL39P62891 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
RPL39P62891 AC023908.3-201ENST00000564211 3047 ntBASIC11.5□□□□□ -0.57
RPL39P62891 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
RPL39P62891 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
RPL39P62891 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
RPL39P62891 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC11.5□□□□□ -0.57
RPL39P62891 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
RPL39P62891 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
RPL39P62891 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
RPL39P62891 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
RPL39P62891 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
RPL39P62891 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
RPL39P62891 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
RPL39P62891 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
RPL39P62891 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
RPL39P62891 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC11.49□□□□□ -0.57
RPL39P62891 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
RPL39P62891 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
RPL39P62891 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
RPL39P62891 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
RPL39P62891 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC11.49□□□□□ -0.57
RPL39P62891 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
RPL39P62891 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC11.49□□□□□ -0.57
RPL39P62891 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
RPL39P62891 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
RPL39P62891 FXN-203ENST00000396366 922 ntTSL 2 BASIC11.49□□□□□ -0.57
RPL39P62891 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC11.49□□□□□ -0.57
RPL39P62891 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC11.49□□□□□ -0.57
RPL39P62891 IGHV3-47-201ENST00000425060 335 ntBASIC11.49□□□□□ -0.57
RPL39P62891 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC11.49□□□□□ -0.57
RPL39P62891 MDH2-205ENST00000461263 648 ntTSL 2 BASIC11.49□□□□□ -0.57
RPL39P62891 AC093827.2-201ENST00000512654 315 ntBASIC11.49□□□□□ -0.57
RPL39P62891 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC11.49□□□□□ -0.57
RPL39P62891 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC11.49□□□□□ -0.57
RPL39P62891 CIB2-208ENST00000560618 804 ntTSL 2 BASIC11.49□□□□□ -0.57
RPL39P62891 TPSP2-201ENST00000561760 610 ntBASIC11.49□□□□□ -0.57
RPL39P62891 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
RPL39P62891 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC11.49□□□□□ -0.57
RPL39P62891 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC11.49□□□□□ -0.57
RPL39P62891 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
RPL39P62891 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC11.49□□□□□ -0.57
RPL39P62891 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
RPL39P62891 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
RPL39P62891 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
RPL39P62891 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
RPL39P62891 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
RPL39P62891 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC11.49□□□□□ -0.57
RPL39P62891 KCP-203ENST00000610776 5108 ntTSL 5 BASIC11.49□□□□□ -0.57
RPL39P62891 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC11.49□□□□□ -0.57
RPL39P62891 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC11.49□□□□□ -0.57
RPL39P62891 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
RPL39P62891 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
RPL39P62891 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
RPL39P62891 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
RPL39P62891 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
RPL39P62891 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC11.49□□□□□ -0.57
RPL39P62891 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
RPL39P62891 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
RPL39P62891 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
RPL39P62891 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
RPL39P62891 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
RPL39P62891 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
RPL39P62891 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
RPL39P62891 POLL-217ENST00000628479 1953 ntTSL 5 BASIC11.48□□□□□ -0.57
RPL39P62891 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
RPL39P62891 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC11.48□□□□□ -0.57
RPL39P62891 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
RPL39P62891 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC11.48□□□□□ -0.57
RPL39P62891 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC11.48□□□□□ -0.57
RPL39P62891 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
RPL39P62891 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
RPL39P62891 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
RPL39P62891 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
RPL39P62891 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC11.48□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms