Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.92■□□□□ 0.14
CLDN2P57739 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
CLDN2P57739 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CLDN2P57739 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.92■□□□□ 0.14
CLDN2P57739 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CLDN2P57739 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CLDN2P57739 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
CLDN2P57739 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN2P57739 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CLDN2P57739 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN2P57739 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN2P57739 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
CLDN2P57739 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN2P57739 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN2P57739 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN2P57739 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN2P57739 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.91■□□□□ 0.14
CLDN2P57739 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN2P57739 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN2P57739 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN2P57739 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN2P57739 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CLDN2P57739 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.91■□□□□ 0.14
CLDN2P57739 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN2P57739 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN2P57739 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN2P57739 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN2P57739 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.91■□□□□ 0.14
CLDN2P57739 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN2P57739 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN2P57739 AC087499.6-201ENST00000411576 835 ntBASIC15.91■□□□□ 0.14
CLDN2P57739 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.91■□□□□ 0.14
CLDN2P57739 KRT17P7-201ENST00000451704 1104 ntBASIC15.91■□□□□ 0.14
CLDN2P57739 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC15.91■□□□□ 0.14
CLDN2P57739 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC15.91■□□□□ 0.14
CLDN2P57739 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.91■□□□□ 0.14
CLDN2P57739 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.91■□□□□ 0.14
CLDN2P57739 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN2P57739 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC15.91■□□□□ 0.14
CLDN2P57739 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC15.91■□□□□ 0.14
CLDN2P57739 5S_rRNA.22-201ENST00000614916 106 ntBASIC15.91■□□□□ 0.14
CLDN2P57739 AC007431.3-201ENST00000623221 587 ntBASIC15.91■□□□□ 0.14
CLDN2P57739 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC15.91■□□□□ 0.14
CLDN2P57739 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
CLDN2P57739 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.91■□□□□ 0.14
CLDN2P57739 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN2P57739 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CLDN2P57739 AL691432.1-201ENST00000596308 1422 ntBASIC15.91■□□□□ 0.14
CLDN2P57739 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.91■□□□□ 0.14
CLDN2P57739 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.91■□□□□ 0.14
CLDN2P57739 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
CLDN2P57739 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN2P57739 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CLDN2P57739 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC15.91■□□□□ 0.14
CLDN2P57739 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN2P57739 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN2P57739 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.91■□□□□ 0.14
CLDN2P57739 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN2P57739 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CLDN2P57739 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN2P57739 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN2P57739 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN2P57739 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN2P57739 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.9■□□□□ 0.14
CLDN2P57739 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.9■□□□□ 0.14
CLDN2P57739 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC15.9■□□□□ 0.14
CLDN2P57739 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN2P57739 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN2P57739 SLC7A15P-201ENST00000424028 1363 ntBASIC15.9■□□□□ 0.14
CLDN2P57739 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC15.9■□□□□ 0.14
CLDN2P57739 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.9■□□□□ 0.14
CLDN2P57739 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CLDN2P57739 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.9■□□□□ 0.14
CLDN2P57739 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN2P57739 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.9■□□□□ 0.14
CLDN2P57739 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.9■□□□□ 0.14
CLDN2P57739 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
CLDN2P57739 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN2P57739 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
CLDN2P57739 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
CLDN2P57739 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.9■□□□□ 0.14
CLDN2P57739 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
CLDN2P57739 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN2P57739 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC15.9■□□□□ 0.14
CLDN2P57739 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN2P57739 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC15.9■□□□□ 0.14
CLDN2P57739 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN2P57739 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC15.9■□□□□ 0.14
CLDN2P57739 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN2P57739 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC15.9■□□□□ 0.14
CLDN2P57739 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC15.9■□□□□ 0.14
CLDN2P57739 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC15.9■□□□□ 0.14
CLDN2P57739 AC025048.3-201ENST00000590609 569 ntBASIC15.9■□□□□ 0.14
CLDN2P57739 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.9■□□□□ 0.14
CLDN2P57739 AC005702.4-201ENST00000618393 416 ntBASIC15.9■□□□□ 0.14
CLDN2P57739 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
CLDN2P57739 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN2P57739 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN2P57739 CU639417.3-201ENST00000624240 1404 ntBASIC15.9■□□□□ 0.14
CLDN2P57739 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms