Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC17.79■□□□□ 0.44
PMS1P54277 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PMS1P54277 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PMS1P54277 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
PMS1P54277 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PMS1P54277 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC17.79■□□□□ 0.44
PMS1P54277 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC17.79■□□□□ 0.44
PMS1P54277 DKFZP434H168-201ENST00000567381 1905 ntBASIC17.79■□□□□ 0.44
PMS1P54277 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC17.79■□□□□ 0.44
PMS1P54277 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PMS1P54277 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PMS1P54277 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
PMS1P54277 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
PMS1P54277 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PMS1P54277 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.79■□□□□ 0.44
PMS1P54277 KRT8P48-201ENST00000515599 1220 ntBASIC17.79■□□□□ 0.44
PMS1P54277 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC17.79■□□□□ 0.44
PMS1P54277 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC17.79■□□□□ 0.44
PMS1P54277 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.79■□□□□ 0.44
PMS1P54277 AC027307.2-201ENST00000591252 911 ntBASIC17.79■□□□□ 0.44
PMS1P54277 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.79■□□□□ 0.44
PMS1P54277 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.79■□□□□ 0.44
PMS1P54277 SPTSSB-204ENST00000617024 1292 ntBASIC17.79■□□□□ 0.44
PMS1P54277 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC17.79■□□□□ 0.44
PMS1P54277 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC17.79■□□□□ 0.44
PMS1P54277 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PMS1P54277 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PMS1P54277 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
PMS1P54277 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PMS1P54277 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC17.79■□□□□ 0.44
PMS1P54277 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
PMS1P54277 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC17.79■□□□□ 0.44
PMS1P54277 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PMS1P54277 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PMS1P54277 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
PMS1P54277 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PMS1P54277 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
PMS1P54277 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC17.79■□□□□ 0.44
PMS1P54277 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.79■□□□□ 0.44
PMS1P54277 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PMS1P54277 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PMS1P54277 SSR4P1-203ENST00000599569 2260 ntBASIC17.78■□□□□ 0.44
PMS1P54277 AKAP8P1-201ENST00000434743 1349 ntBASIC17.78■□□□□ 0.44
PMS1P54277 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC17.78■□□□□ 0.44
PMS1P54277 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PMS1P54277 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC17.78■□□□□ 0.44
PMS1P54277 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PMS1P54277 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PMS1P54277 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17.78■□□□□ 0.44
PMS1P54277 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PMS1P54277 CASK-202ENST00000378158 3848 ntTSL 5 BASIC17.78■□□□□ 0.44
PMS1P54277 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
PMS1P54277 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.78■□□□□ 0.44
PMS1P54277 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC17.78■□□□□ 0.44
PMS1P54277 AC098859.1-201ENST00000502915 1238 ntBASIC17.78■□□□□ 0.44
PMS1P54277 AC105233.2-201ENST00000523697 349 ntBASIC17.78■□□□□ 0.44
PMS1P54277 EHF-205ENST00000527935 557 ntTSL 2 BASIC17.78■□□□□ 0.44
PMS1P54277 AF228730.5-201ENST00000530288 346 ntBASIC17.78■□□□□ 0.44
PMS1P54277 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.78■□□□□ 0.44
PMS1P54277 LINC01225-203ENST00000563550 1244 ntBASIC17.78■□□□□ 0.44
PMS1P54277 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.78■□□□□ 0.44
PMS1P54277 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.78■□□□□ 0.44
PMS1P54277 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.78■□□□□ 0.44
PMS1P54277 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.78■□□□□ 0.44
PMS1P54277 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PMS1P54277 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PMS1P54277 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC17.78■□□□□ 0.44
PMS1P54277 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PMS1P54277 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PMS1P54277 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PMS1P54277 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC17.78■□□□□ 0.44
PMS1P54277 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PMS1P54277 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PMS1P54277 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PMS1P54277 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.78■□□□□ 0.44
PMS1P54277 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PMS1P54277 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PMS1P54277 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC17.77■□□□□ 0.44
PMS1P54277 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC17.77■□□□□ 0.44
PMS1P54277 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC17.77■□□□□ 0.44
PMS1P54277 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
PMS1P54277 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PMS1P54277 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
PMS1P54277 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PMS1P54277 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PMS1P54277 AMT-233ENST00000636522 1620 ntTSL 2 BASIC17.77■□□□□ 0.44
PMS1P54277 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
PMS1P54277 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PMS1P54277 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
PMS1P54277 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
PMS1P54277 MCCD1P2-201ENST00000423228 335 ntBASIC17.77■□□□□ 0.44
PMS1P54277 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.77■□□□□ 0.44
PMS1P54277 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.77■□□□□ 0.44
PMS1P54277 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.77■□□□□ 0.44
PMS1P54277 AC008267.7-201ENST00000624570 1194 ntBASIC17.77■□□□□ 0.44
PMS1P54277 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
PMS1P54277 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
PMS1P54277 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PMS1P54277 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
PMS1P54277 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms