Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PDX1P52945 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.7■□□□□ 0.1
PDX1P52945 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PDX1P52945 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.7■□□□□ 0.1
PDX1P52945 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PDX1P52945 BTBD7P1-201ENST00000447253 1453 ntBASIC15.7■□□□□ 0.1
PDX1P52945 AC138969.3-201ENST00000546612 1459 ntBASIC15.7■□□□□ 0.1
PDX1P52945 AC138932.2-201ENST00000548268 1459 ntBASIC15.7■□□□□ 0.1
PDX1P52945 AC126755.4-201ENST00000549796 1459 ntBASIC15.7■□□□□ 0.1
PDX1P52945 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PDX1P52945 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PDX1P52945 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PDX1P52945 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.7■□□□□ 0.1
PDX1P52945 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
PDX1P52945 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PDX1P52945 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC15.7■□□□□ 0.1
PDX1P52945 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PDX1P52945 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
PDX1P52945 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15.69■□□□□ 0.1
PDX1P52945 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC15.69■□□□□ 0.1
PDX1P52945 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PDX1P52945 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
PDX1P52945 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PDX1P52945 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
PDX1P52945 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PDX1P52945 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PDX1P52945 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PDX1P52945 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PDX1P52945 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PDX1P52945 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PDX1P52945 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC15.69■□□□□ 0.1
PDX1P52945 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
PDX1P52945 WASH4P-201ENST00000564273 1246 ntBASIC15.69■□□□□ 0.1
PDX1P52945 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.69■□□□□ 0.1
PDX1P52945 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC15.69■□□□□ 0.1
PDX1P52945 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC15.69■□□□□ 0.1
PDX1P52945 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PDX1P52945 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
PDX1P52945 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.69■□□□□ 0.1
PDX1P52945 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC15.69■□□□□ 0.1
PDX1P52945 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.69■□□□□ 0.1
PDX1P52945 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.69■□□□□ 0.1
PDX1P52945 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
PDX1P52945 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
PDX1P52945 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PDX1P52945 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
PDX1P52945 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.68■□□□□ 0.1
PDX1P52945 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PDX1P52945 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PDX1P52945 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PDX1P52945 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
PDX1P52945 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.68■□□□□ 0.1
PDX1P52945 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PDX1P52945 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PDX1P52945 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
PDX1P52945 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.68■□□□□ 0.1
PDX1P52945 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
PDX1P52945 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PDX1P52945 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
PDX1P52945 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.68■□□□□ 0.1
PDX1P52945 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.68■□□□□ 0.1
PDX1P52945 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.68■□□□□ 0.1
PDX1P52945 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PDX1P52945 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PDX1P52945 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
PDX1P52945 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PDX1P52945 PGF-202ENST00000405431 666 ntTSL 5 BASIC15.68■□□□□ 0.1
PDX1P52945 DFFBP1-201ENST00000433250 979 ntBASIC15.68■□□□□ 0.1
PDX1P52945 RASL12-203ENST00000434605 982 ntTSL 2 BASIC15.68■□□□□ 0.1
PDX1P52945 AC093724.1-201ENST00000448659 1027 ntBASIC15.68■□□□□ 0.1
PDX1P52945 RN7SL618P-201ENST00000477850 296 ntBASIC15.68■□□□□ 0.1
PDX1P52945 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
PDX1P52945 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC15.68■□□□□ 0.1
PDX1P52945 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC15.68■□□□□ 0.1
PDX1P52945 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC15.68■□□□□ 0.1
PDX1P52945 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC15.68■□□□□ 0.1
PDX1P52945 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC15.68■□□□□ 0.1
PDX1P52945 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC15.68■□□□□ 0.1
PDX1P52945 IGHV3-72-202ENST00000621503 303 ntBASIC15.68■□□□□ 0.1
PDX1P52945 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
PDX1P52945 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PDX1P52945 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
PDX1P52945 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.68■□□□□ 0.1
PDX1P52945 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.68■□□□□ 0.1
PDX1P52945 TNRC18P3-201ENST00000441896 2691 ntBASIC15.68■□□□□ 0.1
PDX1P52945 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
PDX1P52945 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
PDX1P52945 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
PDX1P52945 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PDX1P52945 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC15.68■□□□□ 0.1
PDX1P52945 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.68■□□□□ 0.1
PDX1P52945 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PDX1P52945 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PDX1P52945 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PDX1P52945 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PDX1P52945 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
PDX1P52945 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PDX1P52945 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
PDX1P52945 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PDX1P52945 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms