Protein–RNA interactions for Protein: P49765

VEGFB, Vascular endothelial growth factor B, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFBP49765 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC18.18■□□□□ 0.5
VEGFBP49765 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC18.18■□□□□ 0.5
VEGFBP49765 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
VEGFBP49765 AC116345.2-201ENST00000512837 523 ntBASIC18.18■□□□□ 0.5
VEGFBP49765 RTN3P1-201ENST00000536295 711 ntBASIC18.18■□□□□ 0.5
VEGFBP49765 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
VEGFBP49765 AC013355.1-201ENST00000562625 723 ntBASIC18.18■□□□□ 0.5
VEGFBP49765 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
VEGFBP49765 DGAT2L7P-201ENST00000602462 744 ntBASIC18.18■□□□□ 0.5
VEGFBP49765 AP003392.6-201ENST00000607709 325 ntBASIC18.18■□□□□ 0.5
VEGFBP49765 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
VEGFBP49765 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VEGFBP49765 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
VEGFBP49765 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VEGFBP49765 AC073130.3-201ENST00000624389 2278 ntBASIC18.18■□□□□ 0.5
VEGFBP49765 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC18.17■□□□□ 0.5
VEGFBP49765 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
VEGFBP49765 BNIP3P1-202ENST00000550043 1585 ntBASIC18.17■□□□□ 0.5
VEGFBP49765 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
VEGFBP49765 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
VEGFBP49765 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
VEGFBP49765 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
VEGFBP49765 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
VEGFBP49765 AC092068.3-201ENST00000587894 2016 ntBASIC18.17■□□□□ 0.5
VEGFBP49765 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
VEGFBP49765 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
VEGFBP49765 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
VEGFBP49765 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.17■□□□□ 0.5
VEGFBP49765 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC18.17■□□□□ 0.5
VEGFBP49765 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC18.17■□□□□ 0.5
VEGFBP49765 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC18.17■□□□□ 0.5
VEGFBP49765 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
VEGFBP49765 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC18.17■□□□□ 0.5
VEGFBP49765 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
VEGFBP49765 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
VEGFBP49765 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC18.17■□□□□ 0.5
VEGFBP49765 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC18.17■□□□□ 0.5
VEGFBP49765 MIR6842-201ENST00000612539 65 ntBASIC18.17■□□□□ 0.5
VEGFBP49765 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
VEGFBP49765 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
VEGFBP49765 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
VEGFBP49765 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
VEGFBP49765 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
VEGFBP49765 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC18.17■□□□□ 0.5
VEGFBP49765 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
VEGFBP49765 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
VEGFBP49765 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
VEGFBP49765 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.17■□□□□ 0.5
VEGFBP49765 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC18.17■□□□□ 0.5
VEGFBP49765 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC18.17■□□□□ 0.5
VEGFBP49765 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
VEGFBP49765 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
VEGFBP49765 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
VEGFBP49765 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC18.16■□□□□ 0.5
VEGFBP49765 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
VEGFBP49765 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.16■□□□□ 0.5
VEGFBP49765 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
VEGFBP49765 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
VEGFBP49765 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
VEGFBP49765 TK1-203ENST00000588734 1681 ntTSL 2 BASIC18.16■□□□□ 0.5
VEGFBP49765 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
VEGFBP49765 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC18.16■□□□□ 0.5
VEGFBP49765 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC18.16■□□□□ 0.5
VEGFBP49765 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
VEGFBP49765 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
VEGFBP49765 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
VEGFBP49765 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
VEGFBP49765 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
VEGFBP49765 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
VEGFBP49765 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC18.16■□□□□ 0.5
VEGFBP49765 AL353637.1-201ENST00000451571 732 ntBASIC18.16■□□□□ 0.5
VEGFBP49765 AC021723.1-201ENST00000486306 515 ntBASIC18.16■□□□□ 0.5
VEGFBP49765 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
VEGFBP49765 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC18.16■□□□□ 0.5
VEGFBP49765 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC18.16■□□□□ 0.5
VEGFBP49765 EID1-202ENST00000560490 584 ntTSL 3 BASIC18.16■□□□□ 0.5
VEGFBP49765 RN7SL713P-201ENST00000582127 302 ntBASIC18.16■□□□□ 0.5
VEGFBP49765 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC18.16■□□□□ 0.5
VEGFBP49765 CDK7-214ENST00000626796 358 ntTSL 5 BASIC18.16■□□□□ 0.5
VEGFBP49765 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC18.16■□□□□ 0.5
VEGFBP49765 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
VEGFBP49765 PRSS30P-206ENST00000641773 873 ntBASIC18.16■□□□□ 0.5
VEGFBP49765 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
VEGFBP49765 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC18.16■□□□□ 0.5
VEGFBP49765 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
VEGFBP49765 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC18.16■□□□□ 0.5
VEGFBP49765 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.16■□□□□ 0.5
VEGFBP49765 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC18.16■□□□□ 0.5
VEGFBP49765 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.16■□□□□ 0.5
VEGFBP49765 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.16■□□□□ 0.5
VEGFBP49765 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
VEGFBP49765 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
VEGFBP49765 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
VEGFBP49765 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC18.15■□□□□ 0.5
VEGFBP49765 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
VEGFBP49765 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
VEGFBP49765 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC18.15■□□□□ 0.5
VEGFBP49765 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VEGFBP49765 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
VEGFBP49765 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms