Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CX3CR1P49238 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CX3CR1P49238 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CX3CR1P49238 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CX3CR1P49238 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CX3CR1P49238 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CX3CR1P49238 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CX3CR1P49238 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC14.28□□□□□ -0.12
CX3CR1P49238 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC14.28□□□□□ -0.12
CX3CR1P49238 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.28□□□□□ -0.12
CX3CR1P49238 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CX3CR1P49238 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CX3CR1P49238 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CX3CR1P49238 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC14.28□□□□□ -0.12
CX3CR1P49238 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC14.28□□□□□ -0.12
CX3CR1P49238 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CX3CR1P49238 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CX3CR1P49238 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.28□□□□□ -0.12
CX3CR1P49238 AC140658.5-201ENST00000438532 169 ntBASIC14.28□□□□□ -0.12
CX3CR1P49238 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC14.28□□□□□ -0.12
CX3CR1P49238 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CX3CR1P49238 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.28□□□□□ -0.12
CX3CR1P49238 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CX3CR1P49238 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC14.28□□□□□ -0.12
CX3CR1P49238 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CX3CR1P49238 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.28□□□□□ -0.12
CX3CR1P49238 AC023824.1-201ENST00000562945 2975 ntBASIC14.28□□□□□ -0.12
CX3CR1P49238 AC034105.1-201ENST00000563488 319 ntBASIC14.28□□□□□ -0.12
CX3CR1P49238 AC145285.3-201ENST00000564603 959 ntBASIC14.28□□□□□ -0.12
CX3CR1P49238 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC14.28□□□□□ -0.12
CX3CR1P49238 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC14.28□□□□□ -0.12
CX3CR1P49238 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC14.28□□□□□ -0.12
CX3CR1P49238 AC016027.1-202ENST00000607927 1699 ntBASIC14.28□□□□□ -0.12
CX3CR1P49238 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.28□□□□□ -0.12
CX3CR1P49238 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.28□□□□□ -0.12
CX3CR1P49238 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CX3CR1P49238 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CX3CR1P49238 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CX3CR1P49238 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CX3CR1P49238 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.27□□□□□ -0.12
CX3CR1P49238 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.27□□□□□ -0.12
CX3CR1P49238 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CX3CR1P49238 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.27□□□□□ -0.12
CX3CR1P49238 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
CX3CR1P49238 AL365209.1-201ENST00000624418 6473 ntBASIC14.27□□□□□ -0.12
CX3CR1P49238 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
CX3CR1P49238 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CX3CR1P49238 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.27□□□□□ -0.12
CX3CR1P49238 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CX3CR1P49238 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CX3CR1P49238 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CX3CR1P49238 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
CX3CR1P49238 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CX3CR1P49238 AC069224.1-201ENST00000566372 1715 ntBASIC14.27□□□□□ -0.12
CX3CR1P49238 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CX3CR1P49238 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CX3CR1P49238 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CX3CR1P49238 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CX3CR1P49238 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.27□□□□□ -0.13
CX3CR1P49238 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CX3CR1P49238 BEX3-201ENST00000361298 921 ntTSL 2 BASIC14.27□□□□□ -0.13
CX3CR1P49238 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CX3CR1P49238 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
CX3CR1P49238 AC092474.2-201ENST00000424288 719 ntBASIC14.27□□□□□ -0.13
CX3CR1P49238 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
CX3CR1P49238 AC093724.1-201ENST00000448659 1027 ntBASIC14.27□□□□□ -0.13
CX3CR1P49238 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC14.27□□□□□ -0.13
CX3CR1P49238 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.27□□□□□ -0.13
CX3CR1P49238 KRT19P2-202ENST00000557173 1012 ntBASIC14.27□□□□□ -0.13
CX3CR1P49238 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14.27□□□□□ -0.13
CX3CR1P49238 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC14.27□□□□□ -0.13
CX3CR1P49238 KLK8-205ENST00000593490 267 ntTSL 3 BASIC14.27□□□□□ -0.13
CX3CR1P49238 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC14.27□□□□□ -0.13
CX3CR1P49238 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.27□□□□□ -0.13
CX3CR1P49238 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.27□□□□□ -0.13
CX3CR1P49238 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
CX3CR1P49238 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.27□□□□□ -0.13
CX3CR1P49238 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.27□□□□□ -0.13
CX3CR1P49238 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.27□□□□□ -0.13
CX3CR1P49238 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CX3CR1P49238 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
CX3CR1P49238 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.27□□□□□ -0.13
CX3CR1P49238 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.27□□□□□ -0.13
CX3CR1P49238 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CX3CR1P49238 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CX3CR1P49238 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CX3CR1P49238 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.27□□□□□ -0.13
CX3CR1P49238 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CX3CR1P49238 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
CX3CR1P49238 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
CX3CR1P49238 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.27□□□□□ -0.13
CX3CR1P49238 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CX3CR1P49238 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.27□□□□□ -0.13
CX3CR1P49238 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CX3CR1P49238 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.26□□□□□ -0.13
CX3CR1P49238 AC099063.4-201ENST00000641099 1602 ntBASIC14.26□□□□□ -0.13
CX3CR1P49238 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CX3CR1P49238 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.26□□□□□ -0.13
CX3CR1P49238 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CX3CR1P49238 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms