Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CSNK1A1P48729 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.44□□□□□ -0.1
CSNK1A1P48729 PUS1-205ENST00000535067 838 ntTSL 3 BASIC14.44□□□□□ -0.1
CSNK1A1P48729 CCND1-203ENST00000536559 553 ntTSL 3 BASIC14.44□□□□□ -0.1
CSNK1A1P48729 KRT8P23-201ENST00000560090 1207 ntBASIC14.44□□□□□ -0.1
CSNK1A1P48729 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC14.44□□□□□ -0.1
CSNK1A1P48729 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.44□□□□□ -0.1
CSNK1A1P48729 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
CSNK1A1P48729 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CSNK1A1P48729 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC14.44□□□□□ -0.1
CSNK1A1P48729 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CSNK1A1P48729 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CSNK1A1P48729 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
CSNK1A1P48729 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CSNK1A1P48729 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
CSNK1A1P48729 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.44□□□□□ -0.1
CSNK1A1P48729 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.44□□□□□ -0.1
CSNK1A1P48729 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CSNK1A1P48729 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CSNK1A1P48729 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.44□□□□□ -0.1
CSNK1A1P48729 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CSNK1A1P48729 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.43□□□□□ -0.1
CSNK1A1P48729 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.43□□□□□ -0.1
CSNK1A1P48729 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CSNK1A1P48729 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.43□□□□□ -0.1
CSNK1A1P48729 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CSNK1A1P48729 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
CSNK1A1P48729 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CSNK1A1P48729 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CSNK1A1P48729 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CSNK1A1P48729 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.43□□□□□ -0.1
CSNK1A1P48729 UXT-AS1-201ENST00000590504 1525 ntBASIC14.43□□□□□ -0.1
CSNK1A1P48729 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
CSNK1A1P48729 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CSNK1A1P48729 AL592309.1-201ENST00000443127 649 ntBASIC14.43□□□□□ -0.1
CSNK1A1P48729 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.43□□□□□ -0.1
CSNK1A1P48729 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.43□□□□□ -0.1
CSNK1A1P48729 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.43□□□□□ -0.1
CSNK1A1P48729 CALM1-205ENST00000553542 877 ntTSL 5 BASIC14.43□□□□□ -0.1
CSNK1A1P48729 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC14.43□□□□□ -0.1
CSNK1A1P48729 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC14.43□□□□□ -0.1
CSNK1A1P48729 AC024267.1-201ENST00000582320 895 ntBASIC14.43□□□□□ -0.1
CSNK1A1P48729 MIR4469-201ENST00000583919 79 ntBASIC14.43□□□□□ -0.1
CSNK1A1P48729 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.43□□□□□ -0.1
CSNK1A1P48729 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC14.43□□□□□ -0.1
CSNK1A1P48729 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
CSNK1A1P48729 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CSNK1A1P48729 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CSNK1A1P48729 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.43□□□□□ -0.1
CSNK1A1P48729 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CSNK1A1P48729 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.43□□□□□ -0.1
CSNK1A1P48729 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CSNK1A1P48729 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC14.43□□□□□ -0.1
CSNK1A1P48729 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CSNK1A1P48729 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.43□□□□□ -0.1
CSNK1A1P48729 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CSNK1A1P48729 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC14.43□□□□□ -0.1
CSNK1A1P48729 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CSNK1A1P48729 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CSNK1A1P48729 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CSNK1A1P48729 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CSNK1A1P48729 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CSNK1A1P48729 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CSNK1A1P48729 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CSNK1A1P48729 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
CSNK1A1P48729 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.42□□□□□ -0.1
CSNK1A1P48729 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
CSNK1A1P48729 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CSNK1A1P48729 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
CSNK1A1P48729 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CSNK1A1P48729 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CSNK1A1P48729 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.42□□□□□ -0.1
CSNK1A1P48729 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CSNK1A1P48729 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CSNK1A1P48729 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CSNK1A1P48729 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
CSNK1A1P48729 LINC02199-201ENST00000506655 2702 ntBASIC14.42□□□□□ -0.1
CSNK1A1P48729 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.42□□□□□ -0.1
CSNK1A1P48729 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CSNK1A1P48729 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.42□□□□□ -0.1
CSNK1A1P48729 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC14.42□□□□□ -0.1
CSNK1A1P48729 UPF3AP3-201ENST00000420996 769 ntBASIC14.42□□□□□ -0.1
CSNK1A1P48729 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC14.42□□□□□ -0.1
CSNK1A1P48729 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC14.42□□□□□ -0.1
CSNK1A1P48729 AC245100.5-201ENST00000452108 331 ntBASIC14.42□□□□□ -0.1
CSNK1A1P48729 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.42□□□□□ -0.1
CSNK1A1P48729 YBX1P5-201ENST00000509441 847 ntBASIC14.42□□□□□ -0.1
CSNK1A1P48729 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.42□□□□□ -0.1
CSNK1A1P48729 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.42□□□□□ -0.1
CSNK1A1P48729 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.42□□□□□ -0.1
CSNK1A1P48729 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CSNK1A1P48729 AP000842.3-202ENST00000569238 1080 ntBASIC14.42□□□□□ -0.1
CSNK1A1P48729 MIR4321-201ENST00000592276 80 ntBASIC14.42□□□□□ -0.1
CSNK1A1P48729 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC14.42□□□□□ -0.1
CSNK1A1P48729 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CSNK1A1P48729 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
CSNK1A1P48729 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.42□□□□□ -0.1
CSNK1A1P48729 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CSNK1A1P48729 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.42□□□□□ -0.1
CSNK1A1P48729 AC008741.2-201ENST00000612792 3115 ntBASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms