Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
TM4SF4P48230 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
TM4SF4P48230 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
TM4SF4P48230 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TM4SF4P48230 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.1■□□□□ 0.49
TM4SF4P48230 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.1■□□□□ 0.49
TM4SF4P48230 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.1■□□□□ 0.49
TM4SF4P48230 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TM4SF4P48230 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC18.1■□□□□ 0.49
TM4SF4P48230 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TM4SF4P48230 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TM4SF4P48230 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
TM4SF4P48230 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TM4SF4P48230 AL023775.1-201ENST00000454907 1746 ntBASIC18.1■□□□□ 0.49
TM4SF4P48230 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TM4SF4P48230 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC18.1■□□□□ 0.49
TM4SF4P48230 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TM4SF4P48230 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC18.1■□□□□ 0.49
TM4SF4P48230 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TM4SF4P48230 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TM4SF4P48230 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TM4SF4P48230 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
TM4SF4P48230 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC18.1■□□□□ 0.49
TM4SF4P48230 SERPINA13P-202ENST00000478994 924 ntBASIC18.1■□□□□ 0.49
TM4SF4P48230 SUPT4H1P2-201ENST00000501248 353 ntBASIC18.1■□□□□ 0.49
TM4SF4P48230 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC18.1■□□□□ 0.49
TM4SF4P48230 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC18.1■□□□□ 0.49
TM4SF4P48230 AC018635.2-201ENST00000608625 364 ntBASIC18.1■□□□□ 0.49
TM4SF4P48230 AC007663.3-201ENST00000609632 465 ntBASIC18.1■□□□□ 0.49
TM4SF4P48230 AC079336.7-201ENST00000623428 1078 ntBASIC18.1■□□□□ 0.49
TM4SF4P48230 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TM4SF4P48230 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TM4SF4P48230 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TM4SF4P48230 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TM4SF4P48230 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.1■□□□□ 0.49
TM4SF4P48230 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
TM4SF4P48230 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.1■□□□□ 0.49
TM4SF4P48230 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TM4SF4P48230 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TM4SF4P48230 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
TM4SF4P48230 TP73-209ENST00000603362 1668 ntTSL 5 BASIC18.09■□□□□ 0.49
TM4SF4P48230 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
TM4SF4P48230 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
TM4SF4P48230 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC18.09■□□□□ 0.49
TM4SF4P48230 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.09■□□□□ 0.49
TM4SF4P48230 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TM4SF4P48230 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TM4SF4P48230 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
TM4SF4P48230 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TM4SF4P48230 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TM4SF4P48230 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TM4SF4P48230 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC18.09■□□□□ 0.49
TM4SF4P48230 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
TM4SF4P48230 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TM4SF4P48230 HNRNPA1P63-201ENST00000427917 963 ntBASIC18.09■□□□□ 0.49
TM4SF4P48230 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TM4SF4P48230 ATP6V0CP2-201ENST00000469409 207 ntBASIC18.09■□□□□ 0.49
TM4SF4P48230 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
TM4SF4P48230 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TM4SF4P48230 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TM4SF4P48230 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC18.09■□□□□ 0.49
TM4SF4P48230 RN7SL774P-201ENST00000577467 290 ntBASIC18.09■□□□□ 0.49
TM4SF4P48230 AC244157.2-201ENST00000616239 1006 ntBASIC18.09■□□□□ 0.49
TM4SF4P48230 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC18.09■□□□□ 0.49
TM4SF4P48230 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
TM4SF4P48230 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TM4SF4P48230 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TM4SF4P48230 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.09■□□□□ 0.49
TM4SF4P48230 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
TM4SF4P48230 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.09■□□□□ 0.49
TM4SF4P48230 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TM4SF4P48230 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TM4SF4P48230 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TM4SF4P48230 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TM4SF4P48230 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
TM4SF4P48230 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
TM4SF4P48230 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TM4SF4P48230 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TM4SF4P48230 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TM4SF4P48230 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC18.08■□□□□ 0.48
TM4SF4P48230 SMS-201ENST00000379404 1174 ntTSL 3 BASIC18.08■□□□□ 0.48
TM4SF4P48230 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC18.08■□□□□ 0.48
TM4SF4P48230 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC18.08■□□□□ 0.48
TM4SF4P48230 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
TM4SF4P48230 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TM4SF4P48230 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TM4SF4P48230 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TM4SF4P48230 RN7SL48P-201ENST00000579283 293 ntBASIC18.08■□□□□ 0.48
TM4SF4P48230 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
TM4SF4P48230 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TM4SF4P48230 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
TM4SF4P48230 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TM4SF4P48230 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.08■□□□□ 0.48
TM4SF4P48230 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TM4SF4P48230 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.08■□□□□ 0.48
TM4SF4P48230 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TM4SF4P48230 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.08■□□□□ 0.48
TM4SF4P48230 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TM4SF4P48230 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TM4SF4P48230 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms