Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CKS2P33552 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CKS2P33552 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CKS2P33552 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
CKS2P33552 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CKS2P33552 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CKS2P33552 GSN-206ENST00000394353 2311 ntTSL 2 BASIC11.97□□□□□ -0.49
CKS2P33552 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CKS2P33552 BAALC-201ENST00000297574 801 ntTSL 3 BASIC11.97□□□□□ -0.49
CKS2P33552 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CKS2P33552 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CKS2P33552 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC11.97□□□□□ -0.49
CKS2P33552 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
CKS2P33552 LIN28AP1-201ENST00000429574 405 ntBASIC11.97□□□□□ -0.49
CKS2P33552 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CKS2P33552 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC11.97□□□□□ -0.49
CKS2P33552 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC11.97□□□□□ -0.49
CKS2P33552 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC11.97□□□□□ -0.49
CKS2P33552 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
CKS2P33552 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC11.97□□□□□ -0.49
CKS2P33552 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CKS2P33552 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
CKS2P33552 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CKS2P33552 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
CKS2P33552 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
CKS2P33552 CICP24-201ENST00000605464 2705 ntBASIC11.97□□□□□ -0.49
CKS2P33552 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC11.97□□□□□ -0.49
CKS2P33552 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
CKS2P33552 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
CKS2P33552 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CKS2P33552 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CKS2P33552 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
CKS2P33552 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CKS2P33552 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CKS2P33552 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CKS2P33552 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CKS2P33552 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CKS2P33552 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
CKS2P33552 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CKS2P33552 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC11.96□□□□□ -0.49
CKS2P33552 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
CKS2P33552 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
CKS2P33552 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CKS2P33552 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
CKS2P33552 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC11.96□□□□□ -0.49
CKS2P33552 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CKS2P33552 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
CKS2P33552 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC11.96□□□□□ -0.49
CKS2P33552 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CKS2P33552 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CKS2P33552 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC11.96□□□□□ -0.49
CKS2P33552 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CKS2P33552 AC023908.3-201ENST00000564211 3047 ntBASIC11.96□□□□□ -0.49
CKS2P33552 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
CKS2P33552 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC11.96□□□□□ -0.49
CKS2P33552 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC11.96□□□□□ -0.49
CKS2P33552 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CKS2P33552 CTNS-203ENST00000399306 803 ntTSL 3 BASIC11.96□□□□□ -0.49
CKS2P33552 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CKS2P33552 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC11.96□□□□□ -0.49
CKS2P33552 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC11.96□□□□□ -0.49
CKS2P33552 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC11.96□□□□□ -0.49
CKS2P33552 ATP5G1P1-201ENST00000448724 379 ntBASIC11.96□□□□□ -0.49
CKS2P33552 MDH2-205ENST00000461263 648 ntTSL 2 BASIC11.96□□□□□ -0.49
CKS2P33552 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC11.96□□□□□ -0.49
CKS2P33552 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC11.96□□□□□ -0.49
CKS2P33552 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC11.96□□□□□ -0.49
CKS2P33552 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC11.96□□□□□ -0.49
CKS2P33552 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC11.96□□□□□ -0.49
CKS2P33552 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC11.96□□□□□ -0.49
CKS2P33552 AL353801.3-201ENST00000609898 542 ntBASIC11.96□□□□□ -0.49
CKS2P33552 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
CKS2P33552 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CKS2P33552 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CKS2P33552 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC11.96□□□□□ -0.49
CKS2P33552 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
CKS2P33552 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
CKS2P33552 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
CKS2P33552 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
CKS2P33552 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
CKS2P33552 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC11.96□□□□□ -0.5
CKS2P33552 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
CKS2P33552 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
CKS2P33552 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
CKS2P33552 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC11.96□□□□□ -0.5
CKS2P33552 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
CKS2P33552 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
CKS2P33552 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC11.96□□□□□ -0.5
CKS2P33552 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.5
CKS2P33552 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC11.96□□□□□ -0.5
CKS2P33552 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
CKS2P33552 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
CKS2P33552 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.5
CKS2P33552 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC11.95□□□□□ -0.5
CKS2P33552 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
CKS2P33552 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CKS2P33552 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC11.95□□□□□ -0.5
CKS2P33552 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC11.95□□□□□ -0.5
CKS2P33552 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CKS2P33552 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms