Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD40LGP29965 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
CD40LGP29965 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD40LGP29965 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC14.42□□□□□ -0.1
CD40LGP29965 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CD40LGP29965 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD40LGP29965 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.42□□□□□ -0.1
CD40LGP29965 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC14.42□□□□□ -0.1
CD40LGP29965 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CD40LGP29965 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD40LGP29965 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD40LGP29965 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD40LGP29965 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD40LGP29965 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD40LGP29965 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CD40LGP29965 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD40LGP29965 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD40LGP29965 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD40LGP29965 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.42□□□□□ -0.1
CD40LGP29965 PCGF3-213ENST00000620529 1899 ntBASIC14.42□□□□□ -0.1
CD40LGP29965 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
CD40LGP29965 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CD40LGP29965 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CD40LGP29965 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.41□□□□□ -0.1
CD40LGP29965 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CD40LGP29965 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CD40LGP29965 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CD40LGP29965 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CD40LGP29965 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CD40LGP29965 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CD40LGP29965 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CD40LGP29965 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CD40LGP29965 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CD40LGP29965 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CD40LGP29965 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CD40LGP29965 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CD40LGP29965 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CD40LGP29965 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CD40LGP29965 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CD40LGP29965 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CD40LGP29965 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CD40LGP29965 AC117947.1-201ENST00000427448 529 ntBASIC14.41□□□□□ -0.1
CD40LGP29965 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC14.41□□□□□ -0.1
CD40LGP29965 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
CD40LGP29965 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC14.41□□□□□ -0.1
CD40LGP29965 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC14.41□□□□□ -0.1
CD40LGP29965 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC14.41□□□□□ -0.1
CD40LGP29965 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC14.41□□□□□ -0.1
CD40LGP29965 VPS72-207ENST00000640458 689 ntTSL 5 BASIC14.41□□□□□ -0.1
CD40LGP29965 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CD40LGP29965 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CD40LGP29965 MED25-212ENST00000618715 1467 ntTSL 5 BASIC14.41□□□□□ -0.1
CD40LGP29965 AC008677.1-201ENST00000519230 1561 ntBASIC14.41□□□□□ -0.1
CD40LGP29965 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.41□□□□□ -0.1
CD40LGP29965 AC009336.1-201ENST00000608941 1553 ntBASIC14.41□□□□□ -0.1
CD40LGP29965 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CD40LGP29965 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.41□□□□□ -0.1
CD40LGP29965 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CD40LGP29965 AC148477.4-201ENST00000613430 1793 ntBASIC14.41□□□□□ -0.1
CD40LGP29965 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.41□□□□□ -0.1
CD40LGP29965 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CD40LGP29965 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CD40LGP29965 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.41□□□□□ -0.1
CD40LGP29965 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CD40LGP29965 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.41□□□□□ -0.1
CD40LGP29965 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
CD40LGP29965 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.41□□□□□ -0.1
CD40LGP29965 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CD40LGP29965 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC14.41□□□□□ -0.1
CD40LGP29965 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC14.4□□□□□ -0.1
CD40LGP29965 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CD40LGP29965 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.4□□□□□ -0.1
CD40LGP29965 AJ011931.1-201ENST00000618749 2492 ntBASIC14.4□□□□□ -0.1
CD40LGP29965 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.4□□□□□ -0.1
CD40LGP29965 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CD40LGP29965 AC112693.3-201ENST00000624819 1983 ntBASIC14.4□□□□□ -0.1
CD40LGP29965 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CD40LGP29965 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.4□□□□□ -0.1
CD40LGP29965 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CD40LGP29965 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CD40LGP29965 SNX33P1-201ENST00000592116 1762 ntBASIC14.4□□□□□ -0.1
CD40LGP29965 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CD40LGP29965 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CD40LGP29965 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CD40LGP29965 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CD40LGP29965 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CD40LGP29965 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CD40LGP29965 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CD40LGP29965 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CD40LGP29965 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CD40LGP29965 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CD40LGP29965 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CD40LGP29965 STARP1-201ENST00000397973 869 ntBASIC14.4□□□□□ -0.1
CD40LGP29965 RCN1P1-201ENST00000400413 996 ntBASIC14.4□□□□□ -0.1
CD40LGP29965 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC14.4□□□□□ -0.1
CD40LGP29965 USF2-205ENST00000594064 1179 ntTSL 2 BASIC14.4□□□□□ -0.1
CD40LGP29965 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CD40LGP29965 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
CD40LGP29965 AL590326.2-201ENST00000625139 305 ntBASIC14.4□□□□□ -0.1
CD40LGP29965 ANKRD20A8P-203ENST00000641373 517 ntBASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms