Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
GDF1P27539 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
GDF1P27539 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.66□□□□□ -0.06
GDF1P27539 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC14.66□□□□□ -0.06
GDF1P27539 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
GDF1P27539 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.66□□□□□ -0.06
GDF1P27539 PCDHA14-201ENST00000506751 2298 ntBASIC14.66□□□□□ -0.06
GDF1P27539 PRORSD1P-202ENST00000563365 2154 ntBASIC14.66□□□□□ -0.06
GDF1P27539 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
GDF1P27539 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC14.65□□□□□ -0.06
GDF1P27539 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
GDF1P27539 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
GDF1P27539 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
GDF1P27539 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
GDF1P27539 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
GDF1P27539 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
GDF1P27539 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.65□□□□□ -0.06
GDF1P27539 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.65□□□□□ -0.06
GDF1P27539 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
GDF1P27539 TSSK5P-201ENST00000423978 907 ntBASIC14.65□□□□□ -0.06
GDF1P27539 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.65□□□□□ -0.06
GDF1P27539 RN7SL618P-201ENST00000477850 296 ntBASIC14.65□□□□□ -0.06
GDF1P27539 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.65□□□□□ -0.06
GDF1P27539 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.65□□□□□ -0.06
GDF1P27539 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.65□□□□□ -0.06
GDF1P27539 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.65□□□□□ -0.06
GDF1P27539 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.65□□□□□ -0.06
GDF1P27539 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
GDF1P27539 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
GDF1P27539 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
GDF1P27539 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
GDF1P27539 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
GDF1P27539 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.65□□□□□ -0.06
GDF1P27539 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
GDF1P27539 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.65□□□□□ -0.06
GDF1P27539 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
GDF1P27539 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
GDF1P27539 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
GDF1P27539 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
GDF1P27539 AC087499.5-201ENST00000452760 1342 ntBASIC14.65□□□□□ -0.06
GDF1P27539 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.65□□□□□ -0.06
GDF1P27539 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
GDF1P27539 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
GDF1P27539 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
GDF1P27539 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
GDF1P27539 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
GDF1P27539 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
GDF1P27539 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
GDF1P27539 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.64□□□□□ -0.07
GDF1P27539 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.64□□□□□ -0.07
GDF1P27539 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.64□□□□□ -0.07
GDF1P27539 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.64□□□□□ -0.07
GDF1P27539 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.64□□□□□ -0.07
GDF1P27539 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
GDF1P27539 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
GDF1P27539 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
GDF1P27539 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
GDF1P27539 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC14.64□□□□□ -0.07
GDF1P27539 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
GDF1P27539 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
GDF1P27539 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
GDF1P27539 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
GDF1P27539 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
GDF1P27539 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
GDF1P27539 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.64□□□□□ -0.07
GDF1P27539 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
GDF1P27539 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
GDF1P27539 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
GDF1P27539 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC14.64□□□□□ -0.07
GDF1P27539 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.64□□□□□ -0.07
GDF1P27539 AC236430.1-201ENST00000402231 743 ntBASIC14.64□□□□□ -0.07
GDF1P27539 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
GDF1P27539 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.64□□□□□ -0.07
GDF1P27539 TERF1P3-201ENST00000505638 1227 ntBASIC14.64□□□□□ -0.07
GDF1P27539 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.64□□□□□ -0.07
GDF1P27539 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
GDF1P27539 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC14.64□□□□□ -0.07
GDF1P27539 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
GDF1P27539 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
GDF1P27539 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
GDF1P27539 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
GDF1P27539 CES3-203ENST00000543856 3178 ntTSL 2 BASIC14.64□□□□□ -0.07
GDF1P27539 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
GDF1P27539 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.64□□□□□ -0.07
GDF1P27539 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
GDF1P27539 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.64□□□□□ -0.07
GDF1P27539 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
GDF1P27539 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.64□□□□□ -0.07
GDF1P27539 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
GDF1P27539 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
GDF1P27539 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.64□□□□□ -0.07
GDF1P27539 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
GDF1P27539 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.63□□□□□ -0.07
GDF1P27539 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.63□□□□□ -0.07
GDF1P27539 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.63□□□□□ -0.07
GDF1P27539 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
GDF1P27539 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
GDF1P27539 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.63□□□□□ -0.07
GDF1P27539 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
GDF1P27539 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms