Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.5■□□□□ 0.23
PTPN3P26045 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN3P26045 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
PTPN3P26045 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.5■□□□□ 0.23
PTPN3P26045 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN3P26045 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.5■□□□□ 0.23
PTPN3P26045 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN3P26045 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN3P26045 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN3P26045 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.5■□□□□ 0.23
PTPN3P26045 BX842568.4-201ENST00000421222 227 ntBASIC16.5■□□□□ 0.23
PTPN3P26045 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.5■□□□□ 0.23
PTPN3P26045 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN3P26045 RNA5SP410-201ENST00000516285 106 ntBASIC16.5■□□□□ 0.23
PTPN3P26045 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.5■□□□□ 0.23
PTPN3P26045 SLC25A39P2-201ENST00000537614 270 ntBASIC16.5■□□□□ 0.23
PTPN3P26045 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.5■□□□□ 0.23
PTPN3P26045 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.5■□□□□ 0.23
PTPN3P26045 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.5■□□□□ 0.23
PTPN3P26045 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.5■□□□□ 0.23
PTPN3P26045 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.5■□□□□ 0.23
PTPN3P26045 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.5■□□□□ 0.23
PTPN3P26045 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.5■□□□□ 0.23
PTPN3P26045 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
PTPN3P26045 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN3P26045 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN3P26045 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.5■□□□□ 0.23
PTPN3P26045 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN3P26045 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.5■□□□□ 0.23
PTPN3P26045 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
PTPN3P26045 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN3P26045 AC105917.1-201ENST00000506637 2539 ntBASIC16.5■□□□□ 0.23
PTPN3P26045 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN3P26045 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
PTPN3P26045 UXT-AS1-201ENST00000590504 1525 ntBASIC16.5■□□□□ 0.23
PTPN3P26045 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN3P26045 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN3P26045 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN3P26045 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.49■□□□□ 0.23
PTPN3P26045 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
PTPN3P26045 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.49■□□□□ 0.23
PTPN3P26045 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PTPN3P26045 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN3P26045 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN3P26045 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN3P26045 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN3P26045 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN3P26045 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN3P26045 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN3P26045 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN3P26045 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN3P26045 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN3P26045 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.49■□□□□ 0.23
PTPN3P26045 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.49■□□□□ 0.23
PTPN3P26045 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN3P26045 AC112482.1-201ENST00000492080 688 ntBASIC16.49■□□□□ 0.23
PTPN3P26045 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
PTPN3P26045 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.49■□□□□ 0.23
PTPN3P26045 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN3P26045 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN3P26045 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.49■□□□□ 0.23
PTPN3P26045 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.49■□□□□ 0.23
PTPN3P26045 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.49■□□□□ 0.23
PTPN3P26045 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN3P26045 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.49■□□□□ 0.23
PTPN3P26045 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN3P26045 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN3P26045 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PTPN3P26045 AC134407.2-201ENST00000625089 1978 ntBASIC16.49■□□□□ 0.23
PTPN3P26045 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.49■□□□□ 0.23
PTPN3P26045 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.49■□□□□ 0.23
PTPN3P26045 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.49■□□□□ 0.23
PTPN3P26045 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN3P26045 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN3P26045 AP001282.1-201ENST00000531301 1499 ntBASIC16.48■□□□□ 0.23
PTPN3P26045 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.48■□□□□ 0.23
PTPN3P26045 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN3P26045 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN3P26045 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.48■□□□□ 0.23
PTPN3P26045 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN3P26045 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
PTPN3P26045 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN3P26045 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN3P26045 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN3P26045 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN3P26045 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.48■□□□□ 0.23
PTPN3P26045 RPSAP43-201ENST00000402237 625 ntBASIC16.48■□□□□ 0.23
PTPN3P26045 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.48■□□□□ 0.23
PTPN3P26045 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.48■□□□□ 0.23
PTPN3P26045 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.48■□□□□ 0.23
PTPN3P26045 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN3P26045 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.48■□□□□ 0.23
PTPN3P26045 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN3P26045 AL513210.1-201ENST00000629608 234 ntBASIC16.48■□□□□ 0.23
PTPN3P26045 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN3P26045 PRAL-201ENST00000624952 3286 ntBASIC16.48■□□□□ 0.23
PTPN3P26045 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
PTPN3P26045 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.48■□□□□ 0.23
PTPN3P26045 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN3P26045 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms