Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.98■□□□□ 0.31
MMP8P22894 ALG1L8P-201ENST00000533887 760 ntBASIC16.98■□□□□ 0.31
MMP8P22894 AC092865.5-201ENST00000545435 363 ntBASIC16.98■□□□□ 0.31
MMP8P22894 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.98■□□□□ 0.31
MMP8P22894 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.98■□□□□ 0.31
MMP8P22894 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.98■□□□□ 0.31
MMP8P22894 AC004835.2-201ENST00000603762 682 ntBASIC16.98■□□□□ 0.31
MMP8P22894 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
MMP8P22894 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
MMP8P22894 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.98■□□□□ 0.31
MMP8P22894 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
MMP8P22894 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MMP8P22894 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
MMP8P22894 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MMP8P22894 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.98■□□□□ 0.31
MMP8P22894 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
MMP8P22894 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.98■□□□□ 0.31
MMP8P22894 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
MMP8P22894 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
MMP8P22894 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MMP8P22894 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
MMP8P22894 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
MMP8P22894 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
MMP8P22894 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
MMP8P22894 CROCCP1-201ENST00000426910 5675 ntBASIC16.97■□□□□ 0.31
MMP8P22894 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MMP8P22894 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.97■□□□□ 0.31
MMP8P22894 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.97■□□□□ 0.31
MMP8P22894 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.97■□□□□ 0.31
MMP8P22894 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.97■□□□□ 0.31
MMP8P22894 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
MMP8P22894 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.97■□□□□ 0.31
MMP8P22894 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
MMP8P22894 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
MMP8P22894 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MMP8P22894 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
MMP8P22894 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MMP8P22894 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
MMP8P22894 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.97■□□□□ 0.31
MMP8P22894 AC211486.1-202ENST00000416371 468 ntBASIC16.97■□□□□ 0.31
MMP8P22894 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.97■□□□□ 0.31
MMP8P22894 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MMP8P22894 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.97■□□□□ 0.31
MMP8P22894 AL139010.1-201ENST00000454878 894 ntBASIC16.97■□□□□ 0.31
MMP8P22894 AC211476.1-201ENST00000503899 468 ntBASIC16.97■□□□□ 0.31
MMP8P22894 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.97■□□□□ 0.31
MMP8P22894 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MMP8P22894 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.97■□□□□ 0.31
MMP8P22894 CALM1-205ENST00000553542 877 ntTSL 5 BASIC16.97■□□□□ 0.31
MMP8P22894 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.97■□□□□ 0.31
MMP8P22894 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.97■□□□□ 0.31
MMP8P22894 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MMP8P22894 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
MMP8P22894 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.97■□□□□ 0.31
MMP8P22894 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MMP8P22894 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MMP8P22894 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
MMP8P22894 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.97■□□□□ 0.31
MMP8P22894 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
MMP8P22894 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
MMP8P22894 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MMP8P22894 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.97■□□□□ 0.31
MMP8P22894 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MMP8P22894 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MMP8P22894 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MMP8P22894 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
MMP8P22894 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
MMP8P22894 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
MMP8P22894 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MMP8P22894 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
MMP8P22894 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
MMP8P22894 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.96■□□□□ 0.31
MMP8P22894 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.96■□□□□ 0.31
MMP8P22894 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MMP8P22894 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
MMP8P22894 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
MMP8P22894 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.96■□□□□ 0.31
MMP8P22894 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC16.96■□□□□ 0.31
MMP8P22894 WDR88-203ENST00000592765 651 ntTSL 5 BASIC16.96■□□□□ 0.31
MMP8P22894 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
MMP8P22894 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
MMP8P22894 CYP4F24P-201ENST00000586049 1580 ntBASIC16.96■□□□□ 0.31
MMP8P22894 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
MMP8P22894 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
MMP8P22894 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MMP8P22894 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MMP8P22894 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
MMP8P22894 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.3
MMP8P22894 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
MMP8P22894 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
MMP8P22894 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
MMP8P22894 AP003680.1-201ENST00000598970 3660 ntBASIC16.95■□□□□ 0.3
MMP8P22894 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MMP8P22894 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MMP8P22894 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
MMP8P22894 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
MMP8P22894 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.95■□□□□ 0.3
MMP8P22894 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MMP8P22894 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
MMP8P22894 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms