Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC15.63■□□□□ 0.09
CAPN3P20807 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CAPN3P20807 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.63■□□□□ 0.09
CAPN3P20807 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
CAPN3P20807 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.63■□□□□ 0.09
CAPN3P20807 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
CAPN3P20807 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.63■□□□□ 0.09
CAPN3P20807 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
CAPN3P20807 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
CAPN3P20807 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CAPN3P20807 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CAPN3P20807 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
CAPN3P20807 AC023157.3-201ENST00000619086 2088 ntBASIC15.63■□□□□ 0.09
CAPN3P20807 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CAPN3P20807 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
CAPN3P20807 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
CAPN3P20807 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CAPN3P20807 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.63■□□□□ 0.09
CAPN3P20807 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC15.63■□□□□ 0.09
CAPN3P20807 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CAPN3P20807 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.63■□□□□ 0.09
CAPN3P20807 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CAPN3P20807 AC211486.1-202ENST00000416371 468 ntBASIC15.63■□□□□ 0.09
CAPN3P20807 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC15.63■□□□□ 0.09
CAPN3P20807 AC211476.1-201ENST00000503899 468 ntBASIC15.63■□□□□ 0.09
CAPN3P20807 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.63■□□□□ 0.09
CAPN3P20807 OR7E14P-202ENST00000530490 1290 ntBASIC15.63■□□□□ 0.09
CAPN3P20807 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.63■□□□□ 0.09
CAPN3P20807 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC15.63■□□□□ 0.09
CAPN3P20807 AC092364.2-202ENST00000597012 1073 ntBASIC15.63■□□□□ 0.09
CAPN3P20807 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CAPN3P20807 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CAPN3P20807 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CAPN3P20807 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CAPN3P20807 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.63■□□□□ 0.09
CAPN3P20807 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CAPN3P20807 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.63■□□□□ 0.09
CAPN3P20807 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CAPN3P20807 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
CAPN3P20807 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CAPN3P20807 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.63■□□□□ 0.09
CAPN3P20807 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CAPN3P20807 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CAPN3P20807 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
CAPN3P20807 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
CAPN3P20807 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CAPN3P20807 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CAPN3P20807 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CAPN3P20807 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
CAPN3P20807 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC15.62■□□□□ 0.09
CAPN3P20807 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CAPN3P20807 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CAPN3P20807 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
CAPN3P20807 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CAPN3P20807 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CAPN3P20807 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
CAPN3P20807 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
CAPN3P20807 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CAPN3P20807 AC073621.1-201ENST00000392730 636 ntBASIC15.62■□□□□ 0.09
CAPN3P20807 KRT18P27-201ENST00000427733 1299 ntBASIC15.62■□□□□ 0.09
CAPN3P20807 AP006288.1-201ENST00000446065 395 ntBASIC15.62■□□□□ 0.09
CAPN3P20807 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
CAPN3P20807 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.62■□□□□ 0.09
CAPN3P20807 AC092910.1-201ENST00000482027 1129 ntBASIC15.62■□□□□ 0.09
CAPN3P20807 RNA5SP415-201ENST00000517246 115 ntBASIC15.62■□□□□ 0.09
CAPN3P20807 RIN3-211ENST00000557762 517 ntTSL 3 BASIC15.62■□□□□ 0.09
CAPN3P20807 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
CAPN3P20807 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC15.62■□□□□ 0.09
CAPN3P20807 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CAPN3P20807 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.62■□□□□ 0.09
CAPN3P20807 GGTLC5P-201ENST00000617623 998 ntBASIC15.62■□□□□ 0.09
CAPN3P20807 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.62■□□□□ 0.09
CAPN3P20807 AC107918.4-202ENST00000641623 219 ntBASIC15.62■□□□□ 0.09
CAPN3P20807 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CAPN3P20807 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CAPN3P20807 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.62■□□□□ 0.09
CAPN3P20807 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.62■□□□□ 0.09
CAPN3P20807 AC020658.6-201ENST00000623564 1870 ntBASIC15.62■□□□□ 0.09
CAPN3P20807 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.62■□□□□ 0.09
CAPN3P20807 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CAPN3P20807 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CAPN3P20807 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CAPN3P20807 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.62■□□□□ 0.09
CAPN3P20807 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CAPN3P20807 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CAPN3P20807 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CAPN3P20807 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC15.61■□□□□ 0.09
CAPN3P20807 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
CAPN3P20807 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
CAPN3P20807 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.61■□□□□ 0.09
CAPN3P20807 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
CAPN3P20807 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
CAPN3P20807 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.61■□□□□ 0.09
CAPN3P20807 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
CAPN3P20807 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CAPN3P20807 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.61■□□□□ 0.09
CAPN3P20807 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CAPN3P20807 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CAPN3P20807 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.61■□□□□ 0.09
CAPN3P20807 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms