Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.73■□□□□ 0.43
CLTAP09496 AC003101.2-201ENST00000612557 442 ntBASIC17.73■□□□□ 0.43
CLTAP09496 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.73■□□□□ 0.43
CLTAP09496 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CLTAP09496 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.73■□□□□ 0.43
CLTAP09496 AC093512.1-201ENST00000617969 520 ntBASIC17.73■□□□□ 0.43
CLTAP09496 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
CLTAP09496 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.73■□□□□ 0.43
CLTAP09496 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLTAP09496 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLTAP09496 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.73■□□□□ 0.43
CLTAP09496 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLTAP09496 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLTAP09496 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.73■□□□□ 0.43
CLTAP09496 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLTAP09496 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.73■□□□□ 0.43
CLTAP09496 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLTAP09496 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLTAP09496 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CLTAP09496 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CLTAP09496 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLTAP09496 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CLTAP09496 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLTAP09496 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLTAP09496 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
CLTAP09496 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLTAP09496 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CLTAP09496 AC092364.2-201ENST00000596710 2692 ntBASIC17.73■□□□□ 0.43
CLTAP09496 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLTAP09496 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.73■□□□□ 0.43
CLTAP09496 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLTAP09496 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
CLTAP09496 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.72■□□□□ 0.43
CLTAP09496 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLTAP09496 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.72■□□□□ 0.43
CLTAP09496 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLTAP09496 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLTAP09496 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLTAP09496 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLTAP09496 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
CLTAP09496 AC132872.4-202ENST00000622924 2756 ntBASIC17.72■□□□□ 0.43
CLTAP09496 AC006449.5-201ENST00000610658 2098 ntBASIC17.72■□□□□ 0.43
CLTAP09496 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CLTAP09496 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC17.72■□□□□ 0.43
CLTAP09496 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
CLTAP09496 AC107890.1-201ENST00000422478 521 ntBASIC17.72■□□□□ 0.43
CLTAP09496 AL353705.2-201ENST00000428243 662 ntBASIC17.72■□□□□ 0.43
CLTAP09496 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC17.72■□□□□ 0.43
CLTAP09496 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC17.72■□□□□ 0.43
CLTAP09496 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLTAP09496 AC125807.1-201ENST00000483097 614 ntBASIC17.72■□□□□ 0.43
CLTAP09496 MAX-210ENST00000555419 765 ntTSL 5 BASIC17.72■□□□□ 0.43
CLTAP09496 AC061975.2-201ENST00000581722 295 ntBASIC17.72■□□□□ 0.43
CLTAP09496 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC17.72■□□□□ 0.43
CLTAP09496 AL365330.1-201ENST00000607459 531 ntBASIC17.72■□□□□ 0.43
CLTAP09496 AC007967.4-201ENST00000614700 386 ntBASIC17.72■□□□□ 0.43
CLTAP09496 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLTAP09496 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.72■□□□□ 0.43
CLTAP09496 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.72■□□□□ 0.43
CLTAP09496 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
CLTAP09496 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CLTAP09496 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLTAP09496 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLTAP09496 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.72■□□□□ 0.43
CLTAP09496 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.72■□□□□ 0.43
CLTAP09496 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLTAP09496 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLTAP09496 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC17.72■□□□□ 0.43
CLTAP09496 AC092850.2-201ENST00000623821 2697 ntBASIC17.72■□□□□ 0.43
CLTAP09496 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.72■□□□□ 0.43
CLTAP09496 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
CLTAP09496 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLTAP09496 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CLTAP09496 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLTAP09496 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLTAP09496 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CLTAP09496 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CLTAP09496 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLTAP09496 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CLTAP09496 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.71■□□□□ 0.43
CLTAP09496 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.71■□□□□ 0.43
CLTAP09496 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLTAP09496 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLTAP09496 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CLTAP09496 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLTAP09496 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.71■□□□□ 0.43
CLTAP09496 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CLTAP09496 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
CLTAP09496 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLTAP09496 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLTAP09496 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLTAP09496 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC17.71■□□□□ 0.43
CLTAP09496 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC17.71■□□□□ 0.43
CLTAP09496 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLTAP09496 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLTAP09496 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC17.71■□□□□ 0.43
CLTAP09496 PPP6R2P1-201ENST00000450880 1275 ntBASIC17.71■□□□□ 0.43
CLTAP09496 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CLTAP09496 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC17.71■□□□□ 0.43
CLTAP09496 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms