Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC15.17■□□□□ 0.02
OPN1SWP03999 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.16■□□□□ 0.02
OPN1SWP03999 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
OPN1SWP03999 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
OPN1SWP03999 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
OPN1SWP03999 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
OPN1SWP03999 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.16■□□□□ 0.02
OPN1SWP03999 AC136621.1-201ENST00000624017 2304 ntBASIC15.16■□□□□ 0.02
OPN1SWP03999 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
OPN1SWP03999 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
OPN1SWP03999 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
OPN1SWP03999 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
OPN1SWP03999 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
OPN1SWP03999 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
OPN1SWP03999 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
OPN1SWP03999 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
OPN1SWP03999 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
OPN1SWP03999 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.16■□□□□ 0.02
OPN1SWP03999 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.16■□□□□ 0.02
OPN1SWP03999 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
OPN1SWP03999 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC15.16■□□□□ 0.02
OPN1SWP03999 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.16■□□□□ 0.02
OPN1SWP03999 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.16■□□□□ 0.02
OPN1SWP03999 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.16■□□□□ 0.02
OPN1SWP03999 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC15.16■□□□□ 0.02
OPN1SWP03999 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.16■□□□□ 0.02
OPN1SWP03999 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
OPN1SWP03999 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC15.16■□□□□ 0.02
OPN1SWP03999 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC15.16■□□□□ 0.02
OPN1SWP03999 AL031432.2-201ENST00000566714 459 ntBASIC15.16■□□□□ 0.02
OPN1SWP03999 AL928711.1-201ENST00000570165 459 ntBASIC15.16■□□□□ 0.02
OPN1SWP03999 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.16■□□□□ 0.02
OPN1SWP03999 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
OPN1SWP03999 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.16■□□□□ 0.02
OPN1SWP03999 MIR7706-201ENST00000613747 67 ntBASIC15.16■□□□□ 0.02
OPN1SWP03999 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
OPN1SWP03999 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
OPN1SWP03999 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
OPN1SWP03999 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
OPN1SWP03999 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
OPN1SWP03999 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
OPN1SWP03999 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
OPN1SWP03999 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
OPN1SWP03999 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
OPN1SWP03999 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.16■□□□□ 0.02
OPN1SWP03999 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
OPN1SWP03999 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
OPN1SWP03999 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
OPN1SWP03999 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
OPN1SWP03999 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.15■□□□□ 0.02
OPN1SWP03999 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
OPN1SWP03999 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
OPN1SWP03999 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
OPN1SWP03999 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.15■□□□□ 0.02
OPN1SWP03999 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
OPN1SWP03999 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
OPN1SWP03999 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
OPN1SWP03999 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.15■□□□□ 0.02
OPN1SWP03999 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
OPN1SWP03999 RPS2P28-201ENST00000314255 741 ntBASIC15.15■□□□□ 0.02
OPN1SWP03999 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC15.15■□□□□ 0.02
OPN1SWP03999 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
OPN1SWP03999 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
OPN1SWP03999 IGLL3P-201ENST00000412472 434 ntBASIC15.15■□□□□ 0.02
OPN1SWP03999 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
OPN1SWP03999 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.15■□□□□ 0.02
OPN1SWP03999 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
OPN1SWP03999 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
OPN1SWP03999 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
OPN1SWP03999 AL645728.2-201ENST00000641974 660 ntBASIC15.15■□□□□ 0.02
OPN1SWP03999 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
OPN1SWP03999 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.15■□□□□ 0.02
OPN1SWP03999 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
OPN1SWP03999 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
OPN1SWP03999 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
OPN1SWP03999 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.15■□□□□ 0.02
OPN1SWP03999 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
OPN1SWP03999 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
OPN1SWP03999 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.15■□□□□ 0.02
OPN1SWP03999 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
OPN1SWP03999 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
OPN1SWP03999 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
OPN1SWP03999 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
OPN1SWP03999 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.15■□□□□ 0.02
OPN1SWP03999 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
OPN1SWP03999 AC022532.1-201ENST00000624563 1728 ntBASIC15.14■□□□□ 0.01
OPN1SWP03999 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
OPN1SWP03999 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
OPN1SWP03999 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
OPN1SWP03999 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
OPN1SWP03999 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.14■□□□□ 0.01
OPN1SWP03999 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.14■□□□□ 0.01
OPN1SWP03999 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
OPN1SWP03999 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.14■□□□□ 0.01
OPN1SWP03999 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
OPN1SWP03999 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
OPN1SWP03999 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.14■□□□□ 0.01
OPN1SWP03999 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.14■□□□□ 0.01
OPN1SWP03999 PMS2P4-201ENST00000412466 1052 ntBASIC15.14■□□□□ 0.01
OPN1SWP03999 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms