Protein–RNA interactions for Protein: P02545

LMNA, Prelamin-A/C, humanhuman

Known RBP Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNAP02545 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LMNAP02545 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LMNAP02545 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
LMNAP02545 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LMNAP02545 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.98■□□□□ 0.31
LMNAP02545 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LMNAP02545 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.98■□□□□ 0.31
LMNAP02545 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.98■□□□□ 0.31
LMNAP02545 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LMNAP02545 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.98■□□□□ 0.31
LMNAP02545 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
LMNAP02545 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.98■□□□□ 0.31
LMNAP02545 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.98■□□□□ 0.31
LMNAP02545 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.98■□□□□ 0.31
LMNAP02545 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC16.98■□□□□ 0.31
LMNAP02545 ACA64.2-201ENST00000459014 129 ntBASIC16.98■□□□□ 0.31
LMNAP02545 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.98■□□□□ 0.31
LMNAP02545 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.98■□□□□ 0.31
LMNAP02545 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.98■□□□□ 0.31
LMNAP02545 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC16.98■□□□□ 0.31
LMNAP02545 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
LMNAP02545 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
LMNAP02545 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LMNAP02545 AC100803.2-201ENST00000562459 1963 ntBASIC16.98■□□□□ 0.31
LMNAP02545 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.98■□□□□ 0.31
LMNAP02545 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LMNAP02545 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LMNAP02545 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LMNAP02545 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LMNAP02545 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
LMNAP02545 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.97■□□□□ 0.31
LMNAP02545 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.97■□□□□ 0.31
LMNAP02545 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
LMNAP02545 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LMNAP02545 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
LMNAP02545 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
LMNAP02545 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.97■□□□□ 0.31
LMNAP02545 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
LMNAP02545 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LMNAP02545 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LMNAP02545 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.97■□□□□ 0.31
LMNAP02545 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
LMNAP02545 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.97■□□□□ 0.31
LMNAP02545 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.97■□□□□ 0.31
LMNAP02545 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.97■□□□□ 0.31
LMNAP02545 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.97■□□□□ 0.31
LMNAP02545 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
LMNAP02545 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LMNAP02545 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LMNAP02545 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.97■□□□□ 0.31
LMNAP02545 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LMNAP02545 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LMNAP02545 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LMNAP02545 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LMNAP02545 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LMNAP02545 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LMNAP02545 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.96■□□□□ 0.31
LMNAP02545 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.96■□□□□ 0.31
LMNAP02545 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LMNAP02545 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LMNAP02545 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LMNAP02545 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LMNAP02545 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
LMNAP02545 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LMNAP02545 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
LMNAP02545 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LMNAP02545 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LMNAP02545 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.96■□□□□ 0.31
LMNAP02545 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.96■□□□□ 0.31
LMNAP02545 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
LMNAP02545 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.96■□□□□ 0.31
LMNAP02545 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
LMNAP02545 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LMNAP02545 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
LMNAP02545 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LMNAP02545 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
LMNAP02545 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.96■□□□□ 0.31
LMNAP02545 TSSK5P-201ENST00000423978 907 ntBASIC16.96■□□□□ 0.31
LMNAP02545 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.96■□□□□ 0.31
LMNAP02545 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC16.96■□□□□ 0.31
LMNAP02545 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.96■□□□□ 0.31
LMNAP02545 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.96■□□□□ 0.31
LMNAP02545 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.96■□□□□ 0.31
LMNAP02545 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
LMNAP02545 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.96■□□□□ 0.31
LMNAP02545 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
LMNAP02545 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
LMNAP02545 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LMNAP02545 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.96■□□□□ 0.31
LMNAP02545 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
LMNAP02545 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
LMNAP02545 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.96■□□□□ 0.3
LMNAP02545 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.96■□□□□ 0.3
LMNAP02545 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
LMNAP02545 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
LMNAP02545 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
LMNAP02545 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
LMNAP02545 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.95■□□□□ 0.3
LMNAP02545 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LMNAP02545 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms