Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC19.22■□□□□ 0.67
COL1A1P02452 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC19.22■□□□□ 0.67
COL1A1P02452 TIMM17BP1-201ENST00000545713 516 ntBASIC19.22■□□□□ 0.67
COL1A1P02452 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC19.22■□□□□ 0.67
COL1A1P02452 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC19.22■□□□□ 0.67
COL1A1P02452 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC19.22■□□□□ 0.67
COL1A1P02452 AC010319.3-201ENST00000597028 470 ntBASIC19.22■□□□□ 0.67
COL1A1P02452 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC19.22■□□□□ 0.67
COL1A1P02452 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
COL1A1P02452 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL1A1P02452 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
COL1A1P02452 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
COL1A1P02452 AMT-233ENST00000636522 1620 ntTSL 2 BASIC19.21■□□□□ 0.67
COL1A1P02452 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC19.21■□□□□ 0.67
COL1A1P02452 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC19.21■□□□□ 0.67
COL1A1P02452 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
COL1A1P02452 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
COL1A1P02452 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL1A1P02452 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
COL1A1P02452 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL1A1P02452 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL1A1P02452 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC19.21■□□□□ 0.67
COL1A1P02452 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC19.21■□□□□ 0.67
COL1A1P02452 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL1A1P02452 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC19.21■□□□□ 0.67
COL1A1P02452 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
COL1A1P02452 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC19.21■□□□□ 0.67
COL1A1P02452 KRT43P-201ENST00000434019 910 ntBASIC19.21■□□□□ 0.67
COL1A1P02452 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC19.21■□□□□ 0.67
COL1A1P02452 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
COL1A1P02452 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC19.21■□□□□ 0.67
COL1A1P02452 EHF-205ENST00000527935 557 ntTSL 2 BASIC19.21■□□□□ 0.67
COL1A1P02452 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
COL1A1P02452 NOP2-211ENST00000540228 668 ntTSL 2 BASIC19.21■□□□□ 0.67
COL1A1P02452 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC19.21■□□□□ 0.67
COL1A1P02452 BRI3BPP1-201ENST00000594224 787 ntBASIC19.21■□□□□ 0.67
COL1A1P02452 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC19.21■□□□□ 0.67
COL1A1P02452 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
COL1A1P02452 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
COL1A1P02452 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL1A1P02452 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
COL1A1P02452 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC19.21■□□□□ 0.67
COL1A1P02452 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL1A1P02452 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC19.2■□□□□ 0.66
COL1A1P02452 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
COL1A1P02452 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
COL1A1P02452 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
COL1A1P02452 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL1A1P02452 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL1A1P02452 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL1A1P02452 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC19.2■□□□□ 0.66
COL1A1P02452 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC19.2■□□□□ 0.66
COL1A1P02452 PCDH8P1-201ENST00000428983 2773 ntBASIC19.2■□□□□ 0.66
COL1A1P02452 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL1A1P02452 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL1A1P02452 TOMM22P5-201ENST00000416399 439 ntBASIC19.2■□□□□ 0.66
COL1A1P02452 USP40-206ENST00000443711 628 ntTSL 2 BASIC19.2■□□□□ 0.66
COL1A1P02452 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
COL1A1P02452 RN7SL399P-201ENST00000471648 279 ntBASIC19.2■□□□□ 0.66
COL1A1P02452 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC19.2■□□□□ 0.66
COL1A1P02452 AC104989.1-201ENST00000519711 778 ntBASIC19.2■□□□□ 0.66
COL1A1P02452 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC19.2■□□□□ 0.66
COL1A1P02452 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC19.2■□□□□ 0.66
COL1A1P02452 AC124283.3-201ENST00000570869 594 ntBASIC19.2■□□□□ 0.66
COL1A1P02452 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC19.2■□□□□ 0.66
COL1A1P02452 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
COL1A1P02452 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC19.2■□□□□ 0.66
COL1A1P02452 MIR6775-201ENST00000617557 69 ntBASIC19.2■□□□□ 0.66
COL1A1P02452 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL1A1P02452 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
COL1A1P02452 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
COL1A1P02452 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
COL1A1P02452 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
COL1A1P02452 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC19.2■□□□□ 0.66
COL1A1P02452 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL1A1P02452 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC19.2■□□□□ 0.66
COL1A1P02452 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
COL1A1P02452 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL1A1P02452 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL1A1P02452 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
COL1A1P02452 PRORSD1P-202ENST00000563365 2154 ntBASIC19.19■□□□□ 0.66
COL1A1P02452 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
COL1A1P02452 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
COL1A1P02452 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.19■□□□□ 0.66
COL1A1P02452 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
COL1A1P02452 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
COL1A1P02452 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC19.19■□□□□ 0.66
COL1A1P02452 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC19.19■□□□□ 0.66
COL1A1P02452 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC19.19■□□□□ 0.66
COL1A1P02452 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
COL1A1P02452 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC19.19■□□□□ 0.66
COL1A1P02452 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC19.19■□□□□ 0.66
COL1A1P02452 FAM86MP-201ENST00000340703 885 ntBASIC19.19■□□□□ 0.66
COL1A1P02452 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
COL1A1P02452 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC19.19■□□□□ 0.66
COL1A1P02452 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC19.19■□□□□ 0.66
COL1A1P02452 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
COL1A1P02452 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC19.19■□□□□ 0.66
COL1A1P02452 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
COL1A1P02452 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms