Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HLA-DRAP01903 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HLA-DRAP01903 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HLA-DRAP01903 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HLA-DRAP01903 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HLA-DRAP01903 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.37■□□□□ 0.37
HLA-DRAP01903 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HLA-DRAP01903 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC17.37■□□□□ 0.37
HLA-DRAP01903 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
HLA-DRAP01903 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC17.37■□□□□ 0.37
HLA-DRAP01903 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HLA-DRAP01903 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HLA-DRAP01903 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HLA-DRAP01903 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
HLA-DRAP01903 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HLA-DRAP01903 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HLA-DRAP01903 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.37■□□□□ 0.37
HLA-DRAP01903 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC17.37■□□□□ 0.37
HLA-DRAP01903 SPDYE7P-202ENST00000420373 878 ntBASIC17.37■□□□□ 0.37
HLA-DRAP01903 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC17.37■□□□□ 0.37
HLA-DRAP01903 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
HLA-DRAP01903 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC17.37■□□□□ 0.37
HLA-DRAP01903 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC17.37■□□□□ 0.37
HLA-DRAP01903 AL139010.1-201ENST00000454878 894 ntBASIC17.37■□□□□ 0.37
HLA-DRAP01903 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.37■□□□□ 0.37
HLA-DRAP01903 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC17.37■□□□□ 0.37
HLA-DRAP01903 AC069262.1-201ENST00000539058 672 ntBASIC17.37■□□□□ 0.37
HLA-DRAP01903 AC004449.1-201ENST00000564240 433 ntBASIC17.37■□□□□ 0.37
HLA-DRAP01903 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC17.37■□□□□ 0.37
HLA-DRAP01903 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HLA-DRAP01903 AC007967.4-201ENST00000614700 386 ntBASIC17.37■□□□□ 0.37
HLA-DRAP01903 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.37■□□□□ 0.37
HLA-DRAP01903 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC17.37■□□□□ 0.37
HLA-DRAP01903 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.37■□□□□ 0.37
HLA-DRAP01903 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
HLA-DRAP01903 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
HLA-DRAP01903 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
HLA-DRAP01903 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
HLA-DRAP01903 AC008894.3-201ENST00000624324 3103 ntBASIC17.37■□□□□ 0.37
HLA-DRAP01903 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
HLA-DRAP01903 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
HLA-DRAP01903 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC17.37■□□□□ 0.37
HLA-DRAP01903 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HLA-DRAP01903 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
HLA-DRAP01903 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
HLA-DRAP01903 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.37■□□□□ 0.37
HLA-DRAP01903 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
HLA-DRAP01903 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HLA-DRAP01903 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
HLA-DRAP01903 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-DRAP01903 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-DRAP01903 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-DRAP01903 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-DRAP01903 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-DRAP01903 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.36■□□□□ 0.37
HLA-DRAP01903 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-DRAP01903 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-DRAP01903 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-DRAP01903 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-DRAP01903 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC17.36■□□□□ 0.37
HLA-DRAP01903 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-DRAP01903 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-DRAP01903 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC17.36■□□□□ 0.37
HLA-DRAP01903 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.36■□□□□ 0.37
HLA-DRAP01903 AC243562.2-201ENST00000561247 970 ntBASIC17.36■□□□□ 0.37
HLA-DRAP01903 COQ9-214ENST00000567933 882 ntTSL 3 BASIC17.36■□□□□ 0.37
HLA-DRAP01903 AC026979.3-201ENST00000607315 403 ntBASIC17.36■□□□□ 0.37
HLA-DRAP01903 AC093028.1-201ENST00000622998 982 ntBASIC17.36■□□□□ 0.37
HLA-DRAP01903 Z92544.3-201ENST00000624747 417 ntBASIC17.36■□□□□ 0.37
HLA-DRAP01903 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.36■□□□□ 0.37
HLA-DRAP01903 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-DRAP01903 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
HLA-DRAP01903 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.36■□□□□ 0.37
HLA-DRAP01903 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-DRAP01903 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC17.36■□□□□ 0.37
HLA-DRAP01903 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC17.36■□□□□ 0.37
HLA-DRAP01903 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-DRAP01903 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-DRAP01903 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-DRAP01903 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-DRAP01903 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
HLA-DRAP01903 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
HLA-DRAP01903 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-DRAP01903 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-DRAP01903 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-DRAP01903 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC17.35■□□□□ 0.37
HLA-DRAP01903 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-DRAP01903 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.35■□□□□ 0.37
HLA-DRAP01903 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-DRAP01903 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-DRAP01903 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
HLA-DRAP01903 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-DRAP01903 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-DRAP01903 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-DRAP01903 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-DRAP01903 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-DRAP01903 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-DRAP01903 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-DRAP01903 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
HLA-DRAP01903 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms