Protein–RNA interactions for Protein: P01574

IFNB1, Interferon beta, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNB1P01574 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
IFNB1P01574 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.81■□□□□ 0.28
IFNB1P01574 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.81■□□□□ 0.28
IFNB1P01574 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.81■□□□□ 0.28
IFNB1P01574 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
IFNB1P01574 AC010507.1-201ENST00000633895 436 ntBASIC16.81■□□□□ 0.28
IFNB1P01574 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
IFNB1P01574 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
IFNB1P01574 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
IFNB1P01574 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
IFNB1P01574 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
IFNB1P01574 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.81■□□□□ 0.28
IFNB1P01574 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
IFNB1P01574 AC092919.2-201ENST00000623631 1645 ntBASIC16.81■□□□□ 0.28
IFNB1P01574 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC16.81■□□□□ 0.28
IFNB1P01574 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
IFNB1P01574 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
IFNB1P01574 AC011270.2-201ENST00000624293 2550 ntBASIC16.81■□□□□ 0.28
IFNB1P01574 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
IFNB1P01574 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
IFNB1P01574 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
IFNB1P01574 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
IFNB1P01574 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
IFNB1P01574 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
IFNB1P01574 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.8■□□□□ 0.28
IFNB1P01574 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.8■□□□□ 0.28
IFNB1P01574 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
IFNB1P01574 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
IFNB1P01574 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
IFNB1P01574 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
IFNB1P01574 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
IFNB1P01574 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
IFNB1P01574 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
IFNB1P01574 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
IFNB1P01574 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.8■□□□□ 0.28
IFNB1P01574 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.8■□□□□ 0.28
IFNB1P01574 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.8■□□□□ 0.28
IFNB1P01574 HCG4B-203ENST00000450128 991 ntBASIC16.8■□□□□ 0.28
IFNB1P01574 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.8■□□□□ 0.28
IFNB1P01574 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.8■□□□□ 0.28
IFNB1P01574 AP001005.1-201ENST00000571755 1248 ntBASIC16.8■□□□□ 0.28
IFNB1P01574 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.8■□□□□ 0.28
IFNB1P01574 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.8■□□□□ 0.28
IFNB1P01574 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
IFNB1P01574 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
IFNB1P01574 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
IFNB1P01574 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
IFNB1P01574 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
IFNB1P01574 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.8■□□□□ 0.28
IFNB1P01574 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
IFNB1P01574 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
IFNB1P01574 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
IFNB1P01574 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
IFNB1P01574 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
IFNB1P01574 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
IFNB1P01574 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
IFNB1P01574 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.79■□□□□ 0.28
IFNB1P01574 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
IFNB1P01574 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
IFNB1P01574 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
IFNB1P01574 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
IFNB1P01574 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
IFNB1P01574 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
IFNB1P01574 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
IFNB1P01574 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
IFNB1P01574 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
IFNB1P01574 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.79■□□□□ 0.28
IFNB1P01574 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.79■□□□□ 0.28
IFNB1P01574 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.79■□□□□ 0.28
IFNB1P01574 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
IFNB1P01574 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
IFNB1P01574 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
IFNB1P01574 AC096734.2-201ENST00000562054 433 ntBASIC16.79■□□□□ 0.28
IFNB1P01574 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.79■□□□□ 0.28
IFNB1P01574 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC16.79■□□□□ 0.28
IFNB1P01574 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.79■□□□□ 0.28
IFNB1P01574 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.79■□□□□ 0.28
IFNB1P01574 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.79■□□□□ 0.28
IFNB1P01574 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
IFNB1P01574 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
IFNB1P01574 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.79■□□□□ 0.28
IFNB1P01574 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
IFNB1P01574 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC16.79■□□□□ 0.28
IFNB1P01574 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
IFNB1P01574 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
IFNB1P01574 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
IFNB1P01574 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.79■□□□□ 0.28
IFNB1P01574 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
IFNB1P01574 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.78■□□□□ 0.28
IFNB1P01574 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC16.78■□□□□ 0.28
IFNB1P01574 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.78■□□□□ 0.28
IFNB1P01574 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
IFNB1P01574 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
IFNB1P01574 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
IFNB1P01574 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.78■□□□□ 0.28
IFNB1P01574 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
IFNB1P01574 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
IFNB1P01574 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.78■□□□□ 0.28
IFNB1P01574 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
IFNB1P01574 AC073347.1-201ENST00000421633 2643 ntBASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms