Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
MBD4O95243 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC19.23■□□□□ 0.67
MBD4O95243 FRMD6-AS1-201ENST00000617151 2229 ntBASIC19.23■□□□□ 0.67
MBD4O95243 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MBD4O95243 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MBD4O95243 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
MBD4O95243 MIR648-201ENST00000385046 94 ntBASIC19.23■□□□□ 0.67
MBD4O95243 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
MBD4O95243 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
MBD4O95243 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
MBD4O95243 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC19.23■□□□□ 0.67
MBD4O95243 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC19.23■□□□□ 0.67
MBD4O95243 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MBD4O95243 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
MBD4O95243 LINC02560-201ENST00000596379 459 ntBASIC19.23■□□□□ 0.67
MBD4O95243 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC19.23■□□□□ 0.67
MBD4O95243 ZBTB45P2-201ENST00000452245 1531 ntBASIC19.23■□□□□ 0.67
MBD4O95243 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MBD4O95243 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC19.23■□□□□ 0.67
MBD4O95243 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MBD4O95243 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC19.23■□□□□ 0.67
MBD4O95243 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
MBD4O95243 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
MBD4O95243 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MBD4O95243 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
MBD4O95243 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC19.22■□□□□ 0.67
MBD4O95243 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC19.22■□□□□ 0.67
MBD4O95243 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC19.22■□□□□ 0.67
MBD4O95243 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC19.22■□□□□ 0.67
MBD4O95243 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MBD4O95243 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
MBD4O95243 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MBD4O95243 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MBD4O95243 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
MBD4O95243 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
MBD4O95243 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC19.22■□□□□ 0.67
MBD4O95243 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
MBD4O95243 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
MBD4O95243 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
MBD4O95243 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MBD4O95243 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC19.22■□□□□ 0.67
MBD4O95243 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MBD4O95243 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MBD4O95243 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MBD4O95243 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
MBD4O95243 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC19.22■□□□□ 0.67
MBD4O95243 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC19.22■□□□□ 0.67
MBD4O95243 EEF1DP4-201ENST00000446006 880 ntBASIC19.22■□□□□ 0.67
MBD4O95243 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC19.22■□□□□ 0.67
MBD4O95243 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
MBD4O95243 LHX6-205ENST00000464484 666 ntTSL 2 BASIC19.22■□□□□ 0.67
MBD4O95243 PTK7-212ENST00000476760 902 ntTSL 2 BASIC19.22■□□□□ 0.67
MBD4O95243 FXR1-221ENST00000491674 365 ntTSL 2 BASIC19.22■□□□□ 0.67
MBD4O95243 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC19.22■□□□□ 0.67
MBD4O95243 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC19.22■□□□□ 0.67
MBD4O95243 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC19.22■□□□□ 0.67
MBD4O95243 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
MBD4O95243 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC19.22■□□□□ 0.67
MBD4O95243 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
MBD4O95243 KRT8P37-201ENST00000451609 1420 ntBASIC19.22■□□□□ 0.67
MBD4O95243 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MBD4O95243 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC19.22■□□□□ 0.67
MBD4O95243 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC19.22■□□□□ 0.67
MBD4O95243 AP001282.1-201ENST00000531301 1499 ntBASIC19.22■□□□□ 0.67
MBD4O95243 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MBD4O95243 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC19.21■□□□□ 0.67
MBD4O95243 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
MBD4O95243 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MBD4O95243 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
MBD4O95243 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MBD4O95243 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
MBD4O95243 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MBD4O95243 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MBD4O95243 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC19.21■□□□□ 0.67
MBD4O95243 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MBD4O95243 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC19.21■□□□□ 0.67
MBD4O95243 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
MBD4O95243 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MBD4O95243 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
MBD4O95243 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MBD4O95243 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
MBD4O95243 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MBD4O95243 AZGP1P1-201ENST00000411909 902 ntBASIC19.21■□□□□ 0.67
MBD4O95243 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC19.21■□□□□ 0.67
MBD4O95243 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MBD4O95243 ELP6-209ENST00000446787 894 ntTSL 3 BASIC19.21■□□□□ 0.67
MBD4O95243 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC19.21■□□□□ 0.67
MBD4O95243 OARD1-208ENST00000469104 704 ntTSL 2 BASIC19.21■□□□□ 0.67
MBD4O95243 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC19.21■□□□□ 0.67
MBD4O95243 ZNF890P-202ENST00000530367 1156 ntBASIC19.21■□□□□ 0.67
MBD4O95243 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
MBD4O95243 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
MBD4O95243 SPIB-207ENST00000597855 564 ntTSL 4 BASIC19.21■□□□□ 0.67
MBD4O95243 MIR6069-201ENST00000620069 79 ntBASIC19.21■□□□□ 0.67
MBD4O95243 AC008761.3-201ENST00000624803 892 ntBASIC19.21■□□□□ 0.67
MBD4O95243 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC19.21■□□□□ 0.67
MBD4O95243 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC19.21■□□□□ 0.67
MBD4O95243 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC19.21■□□□□ 0.67
MBD4O95243 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
MBD4O95243 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms