Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDH16O75309 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH16O75309 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDH16O75309 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH16O75309 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH16O75309 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH16O75309 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC16.4■□□□□ 0.22
CDH16O75309 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH16O75309 GOLGA8DP-202ENST00000341390 2184 ntBASIC16.4■□□□□ 0.22
CDH16O75309 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.4■□□□□ 0.22
CDH16O75309 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH16O75309 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.4■□□□□ 0.22
CDH16O75309 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH16O75309 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDH16O75309 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.4■□□□□ 0.22
CDH16O75309 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CDH16O75309 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH16O75309 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH16O75309 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH16O75309 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.4■□□□□ 0.22
CDH16O75309 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
CDH16O75309 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.4■□□□□ 0.22
CDH16O75309 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.4■□□□□ 0.22
CDH16O75309 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.4■□□□□ 0.22
CDH16O75309 CBFB-203ENST00000561924 584 ntTSL 5 BASIC16.4■□□□□ 0.22
CDH16O75309 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.4■□□□□ 0.22
CDH16O75309 MTDHP3-201ENST00000594186 672 ntBASIC16.4■□□□□ 0.22
CDH16O75309 LINC01711-201ENST00000598340 967 ntBASIC16.4■□□□□ 0.22
CDH16O75309 AC138894.3-201ENST00000603787 634 ntBASIC16.4■□□□□ 0.22
CDH16O75309 AL121772.3-201ENST00000610840 674 ntBASIC16.4■□□□□ 0.22
CDH16O75309 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.4■□□□□ 0.22
CDH16O75309 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDH16O75309 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH16O75309 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH16O75309 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.4■□□□□ 0.22
CDH16O75309 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH16O75309 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH16O75309 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH16O75309 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH16O75309 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH16O75309 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CDH16O75309 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH16O75309 AC012569.1-201ENST00000591191 1524 ntBASIC16.4■□□□□ 0.22
CDH16O75309 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH16O75309 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CDH16O75309 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
CDH16O75309 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.39■□□□□ 0.22
CDH16O75309 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.39■□□□□ 0.22
CDH16O75309 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDH16O75309 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.39■□□□□ 0.21
CDH16O75309 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH16O75309 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDH16O75309 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH16O75309 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH16O75309 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDH16O75309 AC105250.1-201ENST00000509378 2057 ntBASIC16.39■□□□□ 0.21
CDH16O75309 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CDH16O75309 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CDH16O75309 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CDH16O75309 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CDH16O75309 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH16O75309 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CDH16O75309 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH16O75309 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH16O75309 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC16.39■□□□□ 0.21
CDH16O75309 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH16O75309 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH16O75309 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH16O75309 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH16O75309 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH16O75309 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.39■□□□□ 0.21
CDH16O75309 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.39■□□□□ 0.21
CDH16O75309 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CDH16O75309 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.39■□□□□ 0.21
CDH16O75309 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
CDH16O75309 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH16O75309 AC245100.5-201ENST00000452108 331 ntBASIC16.39■□□□□ 0.21
CDH16O75309 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.39■□□□□ 0.21
CDH16O75309 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH16O75309 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDH16O75309 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.39■□□□□ 0.21
CDH16O75309 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.39■□□□□ 0.21
CDH16O75309 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.39■□□□□ 0.21
CDH16O75309 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH16O75309 AC021097.1-201ENST00000607902 574 ntBASIC16.39■□□□□ 0.21
CDH16O75309 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH16O75309 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CDH16O75309 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDH16O75309 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDH16O75309 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDH16O75309 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.39■□□□□ 0.21
CDH16O75309 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
CDH16O75309 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDH16O75309 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDH16O75309 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.39■□□□□ 0.21
CDH16O75309 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.39■□□□□ 0.21
CDH16O75309 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.39■□□□□ 0.21
CDH16O75309 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH16O75309 AC090616.6-203ENST00000579186 1945 ntBASIC16.39■□□□□ 0.21
CDH16O75309 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms