Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.51□□□□□ -0.09
ZIC3O60481 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.51□□□□□ -0.09
ZIC3O60481 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ZIC3O60481 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ZIC3O60481 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
ZIC3O60481 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
ZIC3O60481 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.51□□□□□ -0.09
ZIC3O60481 KRT8P37-201ENST00000451609 1420 ntBASIC14.51□□□□□ -0.09
ZIC3O60481 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
ZIC3O60481 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
ZIC3O60481 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
ZIC3O60481 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.51□□□□□ -0.09
ZIC3O60481 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
ZIC3O60481 AC124067.4-201ENST00000519691 2379 ntBASIC14.51□□□□□ -0.09
ZIC3O60481 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ZIC3O60481 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ZIC3O60481 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
ZIC3O60481 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ZIC3O60481 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ZIC3O60481 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ZIC3O60481 MRPS18AP1-201ENST00000414458 589 ntBASIC14.51□□□□□ -0.09
ZIC3O60481 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.51□□□□□ -0.09
ZIC3O60481 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ZIC3O60481 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ZIC3O60481 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.51□□□□□ -0.09
ZIC3O60481 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.51□□□□□ -0.09
ZIC3O60481 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.51□□□□□ -0.09
ZIC3O60481 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.51□□□□□ -0.09
ZIC3O60481 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
ZIC3O60481 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ZIC3O60481 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
ZIC3O60481 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ZIC3O60481 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC14.51□□□□□ -0.09
ZIC3O60481 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
ZIC3O60481 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.51□□□□□ -0.09
ZIC3O60481 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.51□□□□□ -0.09
ZIC3O60481 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ZIC3O60481 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ZIC3O60481 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ZIC3O60481 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ZIC3O60481 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
ZIC3O60481 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
ZIC3O60481 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
ZIC3O60481 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ZIC3O60481 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
ZIC3O60481 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ZIC3O60481 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
ZIC3O60481 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
ZIC3O60481 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ZIC3O60481 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ZIC3O60481 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.5□□□□□ -0.09
ZIC3O60481 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ZIC3O60481 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC14.5□□□□□ -0.09
ZIC3O60481 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ZIC3O60481 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
ZIC3O60481 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.5□□□□□ -0.09
ZIC3O60481 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.5□□□□□ -0.09
ZIC3O60481 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
ZIC3O60481 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14.5□□□□□ -0.09
ZIC3O60481 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ZIC3O60481 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ZIC3O60481 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ZIC3O60481 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ZIC3O60481 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC14.5□□□□□ -0.09
ZIC3O60481 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.5□□□□□ -0.09
ZIC3O60481 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.5□□□□□ -0.09
ZIC3O60481 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.5□□□□□ -0.09
ZIC3O60481 SERBP1P3-201ENST00000459980 809 ntBASIC14.5□□□□□ -0.09
ZIC3O60481 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.5□□□□□ -0.09
ZIC3O60481 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.5□□□□□ -0.09
ZIC3O60481 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ZIC3O60481 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.5□□□□□ -0.09
ZIC3O60481 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.5□□□□□ -0.09
ZIC3O60481 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
ZIC3O60481 AC010336.2-201ENST00000564226 506 ntBASIC14.5□□□□□ -0.09
ZIC3O60481 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.5□□□□□ -0.09
ZIC3O60481 MIR6069-201ENST00000620069 79 ntBASIC14.5□□□□□ -0.09
ZIC3O60481 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.5□□□□□ -0.09
ZIC3O60481 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.5□□□□□ -0.09
ZIC3O60481 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC14.5□□□□□ -0.09
ZIC3O60481 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ZIC3O60481 AC022144.1-201ENST00000602255 1580 ntBASIC14.5□□□□□ -0.09
ZIC3O60481 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
ZIC3O60481 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
ZIC3O60481 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC14.5□□□□□ -0.09
ZIC3O60481 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ZIC3O60481 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ZIC3O60481 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.5□□□□□ -0.09
ZIC3O60481 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
ZIC3O60481 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ZIC3O60481 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ZIC3O60481 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
ZIC3O60481 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
ZIC3O60481 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ZIC3O60481 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.49□□□□□ -0.09
ZIC3O60481 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ZIC3O60481 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.49□□□□□ -0.09
ZIC3O60481 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
ZIC3O60481 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
ZIC3O60481 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 204.4 ms