Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SMAD6O43541 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SMAD6O43541 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.29■□□□□ 0.2
SMAD6O43541 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.29■□□□□ 0.2
SMAD6O43541 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.29■□□□□ 0.2
SMAD6O43541 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.29■□□□□ 0.2
SMAD6O43541 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
SMAD6O43541 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMAD6O43541 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.28■□□□□ 0.2
SMAD6O43541 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SMAD6O43541 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMAD6O43541 LINC02199-201ENST00000506655 2702 ntBASIC16.28■□□□□ 0.2
SMAD6O43541 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMAD6O43541 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.28■□□□□ 0.2
SMAD6O43541 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SMAD6O43541 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMAD6O43541 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMAD6O43541 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMAD6O43541 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMAD6O43541 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMAD6O43541 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMAD6O43541 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMAD6O43541 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SMAD6O43541 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SMAD6O43541 SERBP1P3-201ENST00000459980 809 ntBASIC16.28■□□□□ 0.2
SMAD6O43541 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMAD6O43541 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC16.28■□□□□ 0.2
SMAD6O43541 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SMAD6O43541 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.28■□□□□ 0.2
SMAD6O43541 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.28■□□□□ 0.2
SMAD6O43541 AC008761.3-201ENST00000624803 892 ntBASIC16.28■□□□□ 0.2
SMAD6O43541 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SMAD6O43541 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMAD6O43541 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMAD6O43541 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMAD6O43541 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMAD6O43541 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.28■□□□□ 0.2
SMAD6O43541 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMAD6O43541 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SMAD6O43541 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
SMAD6O43541 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.28■□□□□ 0.2
SMAD6O43541 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SMAD6O43541 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMAD6O43541 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.28■□□□□ 0.2
SMAD6O43541 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.28■□□□□ 0.2
SMAD6O43541 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMAD6O43541 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.27■□□□□ 0.2
SMAD6O43541 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SMAD6O43541 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SMAD6O43541 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SMAD6O43541 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
SMAD6O43541 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.27■□□□□ 0.2
SMAD6O43541 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SMAD6O43541 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.2
SMAD6O43541 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.27■□□□□ 0.2
SMAD6O43541 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SMAD6O43541 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SMAD6O43541 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
SMAD6O43541 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.27■□□□□ 0.2
SMAD6O43541 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SMAD6O43541 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SMAD6O43541 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SMAD6O43541 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SMAD6O43541 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SMAD6O43541 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SMAD6O43541 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
SMAD6O43541 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SMAD6O43541 AZGP1P1-201ENST00000411909 902 ntBASIC16.27■□□□□ 0.2
SMAD6O43541 FAM207CP-201ENST00000443486 507 ntBASIC16.27■□□□□ 0.2
SMAD6O43541 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.27■□□□□ 0.2
SMAD6O43541 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.27■□□□□ 0.2
SMAD6O43541 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.27■□□□□ 0.2
SMAD6O43541 REEP4-207ENST00000523293 913 ntTSL 3 BASIC16.27■□□□□ 0.2
SMAD6O43541 ZNF890P-202ENST00000530367 1156 ntBASIC16.27■□□□□ 0.2
SMAD6O43541 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SMAD6O43541 MIR6069-201ENST00000620069 79 ntBASIC16.27■□□□□ 0.2
SMAD6O43541 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.27■□□□□ 0.2
SMAD6O43541 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.27■□□□□ 0.2
SMAD6O43541 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.27■□□□□ 0.2
SMAD6O43541 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
SMAD6O43541 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SMAD6O43541 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SMAD6O43541 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.27■□□□□ 0.2
SMAD6O43541 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
SMAD6O43541 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.27■□□□□ 0.19
SMAD6O43541 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
SMAD6O43541 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SMAD6O43541 KRT8P37-201ENST00000451609 1420 ntBASIC16.27■□□□□ 0.19
SMAD6O43541 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SMAD6O43541 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.27■□□□□ 0.19
SMAD6O43541 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
SMAD6O43541 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.27■□□□□ 0.19
SMAD6O43541 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.26■□□□□ 0.19
SMAD6O43541 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMAD6O43541 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
SMAD6O43541 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
SMAD6O43541 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
SMAD6O43541 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SMAD6O43541 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMAD6O43541 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms