Protein–RNA interactions for Protein: A6NHC0

CAPN8, Calpain-8, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8A6NHC0 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CAPN8A6NHC0 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
CAPN8A6NHC0 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CAPN8A6NHC0 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CAPN8A6NHC0 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.48■□□□□ 0.23
CAPN8A6NHC0 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CAPN8A6NHC0 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CAPN8A6NHC0 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CAPN8A6NHC0 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CAPN8A6NHC0 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
CAPN8A6NHC0 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CAPN8A6NHC0 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CAPN8A6NHC0 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CAPN8A6NHC0 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CAPN8A6NHC0 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CAPN8A6NHC0 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CAPN8A6NHC0 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
CAPN8A6NHC0 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CAPN8A6NHC0 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CAPN8A6NHC0 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.48■□□□□ 0.23
CAPN8A6NHC0 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.48■□□□□ 0.23
CAPN8A6NHC0 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.48■□□□□ 0.23
CAPN8A6NHC0 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.48■□□□□ 0.23
CAPN8A6NHC0 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.48■□□□□ 0.23
CAPN8A6NHC0 AC142381.1-201ENST00000426099 345 ntBASIC16.48■□□□□ 0.23
CAPN8A6NHC0 AC005237.2-201ENST00000434368 219 ntBASIC16.48■□□□□ 0.23
CAPN8A6NHC0 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CAPN8A6NHC0 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.48■□□□□ 0.23
CAPN8A6NHC0 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.48■□□□□ 0.23
CAPN8A6NHC0 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC16.48■□□□□ 0.23
CAPN8A6NHC0 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.48■□□□□ 0.23
CAPN8A6NHC0 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.48■□□□□ 0.23
CAPN8A6NHC0 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.48■□□□□ 0.23
CAPN8A6NHC0 AC093520.2-201ENST00000561830 333 ntBASIC16.48■□□□□ 0.23
CAPN8A6NHC0 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.48■□□□□ 0.23
CAPN8A6NHC0 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.48■□□□□ 0.23
CAPN8A6NHC0 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.48■□□□□ 0.23
CAPN8A6NHC0 AP000842.3-202ENST00000569238 1080 ntBASIC16.48■□□□□ 0.23
CAPN8A6NHC0 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.48■□□□□ 0.23
CAPN8A6NHC0 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.48■□□□□ 0.23
CAPN8A6NHC0 AC084121.4-201ENST00000641598 221 ntBASIC16.48■□□□□ 0.23
CAPN8A6NHC0 AF228730.8-201ENST00000642140 221 ntBASIC16.48■□□□□ 0.23
CAPN8A6NHC0 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CAPN8A6NHC0 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CAPN8A6NHC0 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CAPN8A6NHC0 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.48■□□□□ 0.23
CAPN8A6NHC0 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CAPN8A6NHC0 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.48■□□□□ 0.23
CAPN8A6NHC0 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.48■□□□□ 0.23
CAPN8A6NHC0 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
CAPN8A6NHC0 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CAPN8A6NHC0 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.48■□□□□ 0.23
CAPN8A6NHC0 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CAPN8A6NHC0 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CAPN8A6NHC0 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CAPN8A6NHC0 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CAPN8A6NHC0 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CAPN8A6NHC0 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CAPN8A6NHC0 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.47■□□□□ 0.23
CAPN8A6NHC0 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
CAPN8A6NHC0 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.47■□□□□ 0.23
CAPN8A6NHC0 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CAPN8A6NHC0 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CAPN8A6NHC0 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.47■□□□□ 0.23
CAPN8A6NHC0 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CAPN8A6NHC0 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CAPN8A6NHC0 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CAPN8A6NHC0 UXT-AS1-201ENST00000590504 1525 ntBASIC16.47■□□□□ 0.23
CAPN8A6NHC0 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CAPN8A6NHC0 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CAPN8A6NHC0 MIR346-201ENST00000362234 95 ntBASIC16.47■□□□□ 0.23
CAPN8A6NHC0 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CAPN8A6NHC0 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CAPN8A6NHC0 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.47■□□□□ 0.23
CAPN8A6NHC0 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CAPN8A6NHC0 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.47■□□□□ 0.23
CAPN8A6NHC0 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.47■□□□□ 0.23
CAPN8A6NHC0 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CAPN8A6NHC0 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.47■□□□□ 0.23
CAPN8A6NHC0 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.47■□□□□ 0.23
CAPN8A6NHC0 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.47■□□□□ 0.23
CAPN8A6NHC0 AC027612.4-201ENST00000605371 583 ntBASIC16.47■□□□□ 0.23
CAPN8A6NHC0 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CAPN8A6NHC0 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CAPN8A6NHC0 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CAPN8A6NHC0 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CAPN8A6NHC0 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CAPN8A6NHC0 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CAPN8A6NHC0 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CAPN8A6NHC0 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CAPN8A6NHC0 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CAPN8A6NHC0 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CAPN8A6NHC0 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.46■□□□□ 0.23
CAPN8A6NHC0 FOXO1B-201ENST00000504678 1527 ntBASIC16.46■□□□□ 0.23
CAPN8A6NHC0 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
CAPN8A6NHC0 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CAPN8A6NHC0 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CAPN8A6NHC0 EDF1-203ENST00000371649 790 ntTSL 2 BASIC16.46■□□□□ 0.23
CAPN8A6NHC0 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.46■□□□□ 0.23
CAPN8A6NHC0 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 127.7 ms