Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
DDX49Q9Y6V7 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
DDX49Q9Y6V7 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
DDX49Q9Y6V7 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC19.54■□□□□ 0.72
DDX49Q9Y6V7 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC19.54■□□□□ 0.72
DDX49Q9Y6V7 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
DDX49Q9Y6V7 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
DDX49Q9Y6V7 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
DDX49Q9Y6V7 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
DDX49Q9Y6V7 SUPT20HL2-201ENST00000486479 2409 ntBASIC19.54■□□□□ 0.72
DDX49Q9Y6V7 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
DDX49Q9Y6V7 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
DDX49Q9Y6V7 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
DDX49Q9Y6V7 CYP51A1P2-201ENST00000419457 1499 ntBASIC19.54■□□□□ 0.72
DDX49Q9Y6V7 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
DDX49Q9Y6V7 AC073347.1-201ENST00000421633 2643 ntBASIC19.54■□□□□ 0.72
DDX49Q9Y6V7 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
DDX49Q9Y6V7 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
DDX49Q9Y6V7 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
DDX49Q9Y6V7 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
DDX49Q9Y6V7 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC19.53■□□□□ 0.72
DDX49Q9Y6V7 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
DDX49Q9Y6V7 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
DDX49Q9Y6V7 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
DDX49Q9Y6V7 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
DDX49Q9Y6V7 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
DDX49Q9Y6V7 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC19.53■□□□□ 0.72
DDX49Q9Y6V7 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
DDX49Q9Y6V7 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
DDX49Q9Y6V7 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
DDX49Q9Y6V7 AL139400.1-201ENST00000366220 510 ntBASIC19.53■□□□□ 0.72
DDX49Q9Y6V7 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
DDX49Q9Y6V7 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
DDX49Q9Y6V7 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
DDX49Q9Y6V7 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
DDX49Q9Y6V7 AC254562.1-201ENST00000417586 456 ntBASIC19.53■□□□□ 0.72
DDX49Q9Y6V7 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
DDX49Q9Y6V7 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC19.53■□□□□ 0.72
DDX49Q9Y6V7 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC19.53■□□□□ 0.72
DDX49Q9Y6V7 AC023141.13-201ENST00000604991 943 ntBASIC19.53■□□□□ 0.72
DDX49Q9Y6V7 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC19.53■□□□□ 0.72
DDX49Q9Y6V7 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
DDX49Q9Y6V7 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC19.53■□□□□ 0.72
DDX49Q9Y6V7 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
DDX49Q9Y6V7 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
DDX49Q9Y6V7 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
DDX49Q9Y6V7 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC19.53■□□□□ 0.72
DDX49Q9Y6V7 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
DDX49Q9Y6V7 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
DDX49Q9Y6V7 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
DDX49Q9Y6V7 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
DDX49Q9Y6V7 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
DDX49Q9Y6V7 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
DDX49Q9Y6V7 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC19.52■□□□□ 0.72
DDX49Q9Y6V7 LINC00895-201ENST00000629028 1637 ntBASIC19.52■□□□□ 0.72
DDX49Q9Y6V7 AMT-233ENST00000636522 1620 ntTSL 2 BASIC19.52■□□□□ 0.72
DDX49Q9Y6V7 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
DDX49Q9Y6V7 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
DDX49Q9Y6V7 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC19.52■□□□□ 0.72
DDX49Q9Y6V7 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
DDX49Q9Y6V7 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC19.52■□□□□ 0.72
DDX49Q9Y6V7 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC19.52■□□□□ 0.72
DDX49Q9Y6V7 MKNK2P1-201ENST00000437526 628 ntBASIC19.52■□□□□ 0.72
DDX49Q9Y6V7 FAM185BP-201ENST00000443595 716 ntBASIC19.52■□□□□ 0.72
DDX49Q9Y6V7 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
DDX49Q9Y6V7 PAWRP1-201ENST00000451083 565 ntBASIC19.52■□□□□ 0.72
DDX49Q9Y6V7 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC19.52■□□□□ 0.72
DDX49Q9Y6V7 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
DDX49Q9Y6V7 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC19.52■□□□□ 0.72
DDX49Q9Y6V7 AC093028.1-201ENST00000622998 982 ntBASIC19.52■□□□□ 0.72
DDX49Q9Y6V7 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
DDX49Q9Y6V7 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC19.52■□□□□ 0.72
DDX49Q9Y6V7 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
DDX49Q9Y6V7 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
DDX49Q9Y6V7 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
DDX49Q9Y6V7 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
DDX49Q9Y6V7 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC19.52■□□□□ 0.71
DDX49Q9Y6V7 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC19.52■□□□□ 0.71
DDX49Q9Y6V7 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
DDX49Q9Y6V7 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
DDX49Q9Y6V7 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
DDX49Q9Y6V7 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
DDX49Q9Y6V7 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC19.51■□□□□ 0.71
DDX49Q9Y6V7 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC19.51■□□□□ 0.71
DDX49Q9Y6V7 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC19.51■□□□□ 0.71
DDX49Q9Y6V7 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
DDX49Q9Y6V7 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC19.51■□□□□ 0.71
DDX49Q9Y6V7 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
DDX49Q9Y6V7 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
DDX49Q9Y6V7 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
DDX49Q9Y6V7 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
DDX49Q9Y6V7 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
DDX49Q9Y6V7 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
DDX49Q9Y6V7 DDT-204ENST00000404092 805 ntTSL 3 BASIC19.51■□□□□ 0.71
DDX49Q9Y6V7 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
DDX49Q9Y6V7 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
DDX49Q9Y6V7 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
DDX49Q9Y6V7 AC087163.2-201ENST00000457299 853 ntBASIC19.51■□□□□ 0.71
DDX49Q9Y6V7 RFPL4AP1-201ENST00000530883 850 ntBASIC19.51■□□□□ 0.71
DDX49Q9Y6V7 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms