Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHB1Q9Y5F3 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHB1Q9Y5F3 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.21■□□□□ 0.19
PCDHB1Q9Y5F3 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.21■□□□□ 0.19
PCDHB1Q9Y5F3 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.21■□□□□ 0.19
PCDHB1Q9Y5F3 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.21■□□□□ 0.19
PCDHB1Q9Y5F3 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHB1Q9Y5F3 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.21■□□□□ 0.19
PCDHB1Q9Y5F3 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
PCDHB1Q9Y5F3 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
PCDHB1Q9Y5F3 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC16.21■□□□□ 0.19
PCDHB1Q9Y5F3 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC16.21■□□□□ 0.19
PCDHB1Q9Y5F3 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHB1Q9Y5F3 AL365330.1-201ENST00000607459 531 ntBASIC16.21■□□□□ 0.19
PCDHB1Q9Y5F3 MIR6080-201ENST00000617359 66 ntBASIC16.21■□□□□ 0.19
PCDHB1Q9Y5F3 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.21■□□□□ 0.19
PCDHB1Q9Y5F3 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHB1Q9Y5F3 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHB1Q9Y5F3 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHB1Q9Y5F3 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHB1Q9Y5F3 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHB1Q9Y5F3 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.21■□□□□ 0.19
PCDHB1Q9Y5F3 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHB1Q9Y5F3 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.21■□□□□ 0.19
PCDHB1Q9Y5F3 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.21■□□□□ 0.19
PCDHB1Q9Y5F3 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
PCDHB1Q9Y5F3 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.21■□□□□ 0.19
PCDHB1Q9Y5F3 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHB1Q9Y5F3 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHB1Q9Y5F3 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHB1Q9Y5F3 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHB1Q9Y5F3 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
PCDHB1Q9Y5F3 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.18
PCDHB1Q9Y5F3 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
PCDHB1Q9Y5F3 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
PCDHB1Q9Y5F3 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.21■□□□□ 0.18
PCDHB1Q9Y5F3 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.18
PCDHB1Q9Y5F3 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
PCDHB1Q9Y5F3 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.21■□□□□ 0.18
PCDHB1Q9Y5F3 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHB1Q9Y5F3 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHB1Q9Y5F3 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHB1Q9Y5F3 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHB1Q9Y5F3 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHB1Q9Y5F3 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHB1Q9Y5F3 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHB1Q9Y5F3 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHB1Q9Y5F3 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.2■□□□□ 0.18
PCDHB1Q9Y5F3 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.2■□□□□ 0.18
PCDHB1Q9Y5F3 FAM207CP-201ENST00000443486 507 ntBASIC16.2■□□□□ 0.18
PCDHB1Q9Y5F3 AL512638.1-201ENST00000457493 794 ntBASIC16.2■□□□□ 0.18
PCDHB1Q9Y5F3 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.2■□□□□ 0.18
PCDHB1Q9Y5F3 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC16.2■□□□□ 0.18
PCDHB1Q9Y5F3 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.2■□□□□ 0.18
PCDHB1Q9Y5F3 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.2■□□□□ 0.18
PCDHB1Q9Y5F3 CECR7-204ENST00000609932 568 ntTSL 2 BASIC16.2■□□□□ 0.18
PCDHB1Q9Y5F3 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.2■□□□□ 0.18
PCDHB1Q9Y5F3 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHB1Q9Y5F3 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.2■□□□□ 0.18
PCDHB1Q9Y5F3 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHB1Q9Y5F3 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
PCDHB1Q9Y5F3 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHB1Q9Y5F3 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHB1Q9Y5F3 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHB1Q9Y5F3 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHB1Q9Y5F3 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHB1Q9Y5F3 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.2■□□□□ 0.18
PCDHB1Q9Y5F3 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHB1Q9Y5F3 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
PCDHB1Q9Y5F3 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHB1Q9Y5F3 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.2■□□□□ 0.18
PCDHB1Q9Y5F3 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHB1Q9Y5F3 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHB1Q9Y5F3 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
PCDHB1Q9Y5F3 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHB1Q9Y5F3 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
PCDHB1Q9Y5F3 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHB1Q9Y5F3 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
PCDHB1Q9Y5F3 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHB1Q9Y5F3 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.19■□□□□ 0.18
PCDHB1Q9Y5F3 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.19■□□□□ 0.18
PCDHB1Q9Y5F3 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
PCDHB1Q9Y5F3 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.19■□□□□ 0.18
PCDHB1Q9Y5F3 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.19■□□□□ 0.18
PCDHB1Q9Y5F3 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHB1Q9Y5F3 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHB1Q9Y5F3 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHB1Q9Y5F3 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
PCDHB1Q9Y5F3 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHB1Q9Y5F3 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHB1Q9Y5F3 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHB1Q9Y5F3 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
PCDHB1Q9Y5F3 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHB1Q9Y5F3 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.19■□□□□ 0.18
PCDHB1Q9Y5F3 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHB1Q9Y5F3 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
PCDHB1Q9Y5F3 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
PCDHB1Q9Y5F3 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHB1Q9Y5F3 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
PCDHB1Q9Y5F3 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms