Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
YIPF1Q9Y548 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC16.8■□□□□ 0.28
YIPF1Q9Y548 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
YIPF1Q9Y548 AGGF1P2-201ENST00000426656 2106 ntBASIC16.8■□□□□ 0.28
YIPF1Q9Y548 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC16.8■□□□□ 0.28
YIPF1Q9Y548 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
YIPF1Q9Y548 GPR53P-205ENST00000457298 1084 ntBASIC16.8■□□□□ 0.28
YIPF1Q9Y548 RN7SL837P-201ENST00000463010 287 ntBASIC16.8■□□□□ 0.28
YIPF1Q9Y548 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
YIPF1Q9Y548 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.8■□□□□ 0.28
YIPF1Q9Y548 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC16.8■□□□□ 0.28
YIPF1Q9Y548 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
YIPF1Q9Y548 NOP2-220ENST00000545915 630 ntTSL 2 BASIC16.8■□□□□ 0.28
YIPF1Q9Y548 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
YIPF1Q9Y548 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
YIPF1Q9Y548 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.8■□□□□ 0.28
YIPF1Q9Y548 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
YIPF1Q9Y548 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.8■□□□□ 0.28
YIPF1Q9Y548 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
YIPF1Q9Y548 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
YIPF1Q9Y548 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.8■□□□□ 0.28
YIPF1Q9Y548 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC16.8■□□□□ 0.28
YIPF1Q9Y548 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC16.8■□□□□ 0.28
YIPF1Q9Y548 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC16.8■□□□□ 0.28
YIPF1Q9Y548 AL008721.1-201ENST00000609964 604 ntBASIC16.8■□□□□ 0.28
YIPF1Q9Y548 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.8■□□□□ 0.28
YIPF1Q9Y548 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
YIPF1Q9Y548 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.8■□□□□ 0.28
YIPF1Q9Y548 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.8■□□□□ 0.28
YIPF1Q9Y548 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
YIPF1Q9Y548 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
YIPF1Q9Y548 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.8■□□□□ 0.28
YIPF1Q9Y548 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
YIPF1Q9Y548 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
YIPF1Q9Y548 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.8■□□□□ 0.28
YIPF1Q9Y548 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.8■□□□□ 0.28
YIPF1Q9Y548 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
YIPF1Q9Y548 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
YIPF1Q9Y548 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
YIPF1Q9Y548 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
YIPF1Q9Y548 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.79■□□□□ 0.28
YIPF1Q9Y548 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
YIPF1Q9Y548 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
YIPF1Q9Y548 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
YIPF1Q9Y548 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.79■□□□□ 0.28
YIPF1Q9Y548 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
YIPF1Q9Y548 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
YIPF1Q9Y548 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.79■□□□□ 0.28
YIPF1Q9Y548 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
YIPF1Q9Y548 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
YIPF1Q9Y548 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
YIPF1Q9Y548 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
YIPF1Q9Y548 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
YIPF1Q9Y548 AC074338.1-201ENST00000416825 156 ntBASIC16.79■□□□□ 0.28
YIPF1Q9Y548 ARSEP1-201ENST00000420443 635 ntBASIC16.79■□□□□ 0.28
YIPF1Q9Y548 RPL13P2-201ENST00000440687 659 ntBASIC16.79■□□□□ 0.28
YIPF1Q9Y548 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC16.79■□□□□ 0.28
YIPF1Q9Y548 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
YIPF1Q9Y548 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC16.79■□□□□ 0.28
YIPF1Q9Y548 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC16.79■□□□□ 0.28
YIPF1Q9Y548 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
YIPF1Q9Y548 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC16.79■□□□□ 0.28
YIPF1Q9Y548 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.79■□□□□ 0.28
YIPF1Q9Y548 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
YIPF1Q9Y548 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
YIPF1Q9Y548 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.79■□□□□ 0.28
YIPF1Q9Y548 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
YIPF1Q9Y548 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC16.79■□□□□ 0.28
YIPF1Q9Y548 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
YIPF1Q9Y548 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
YIPF1Q9Y548 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.79■□□□□ 0.28
YIPF1Q9Y548 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
YIPF1Q9Y548 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.78■□□□□ 0.28
YIPF1Q9Y548 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
YIPF1Q9Y548 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
YIPF1Q9Y548 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
YIPF1Q9Y548 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
YIPF1Q9Y548 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
YIPF1Q9Y548 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
YIPF1Q9Y548 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
YIPF1Q9Y548 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
YIPF1Q9Y548 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
YIPF1Q9Y548 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
YIPF1Q9Y548 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
YIPF1Q9Y548 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
YIPF1Q9Y548 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
YIPF1Q9Y548 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
YIPF1Q9Y548 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
YIPF1Q9Y548 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
YIPF1Q9Y548 HAUS4P1-201ENST00000406739 1145 ntBASIC16.78■□□□□ 0.28
YIPF1Q9Y548 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC16.78■□□□□ 0.28
YIPF1Q9Y548 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC16.78■□□□□ 0.28
YIPF1Q9Y548 ATP5G2P4-201ENST00000442175 420 ntBASIC16.78■□□□□ 0.28
YIPF1Q9Y548 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
YIPF1Q9Y548 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.78■□□□□ 0.28
YIPF1Q9Y548 HILS1-202ENST00000545329 423 ntBASIC16.78■□□□□ 0.28
YIPF1Q9Y548 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC16.78■□□□□ 0.28
YIPF1Q9Y548 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC16.78■□□□□ 0.28
YIPF1Q9Y548 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC16.78■□□□□ 0.28
YIPF1Q9Y548 WFDC1-204ENST00000613603 549 ntBASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms