Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRAPPC4Q9Y296 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.91□□□□□ -0.02
TRAPPC4Q9Y296 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.91□□□□□ -0.02
TRAPPC4Q9Y296 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.91□□□□□ -0.02
TRAPPC4Q9Y296 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRAPPC4Q9Y296 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAPPC4Q9Y296 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.91□□□□□ -0.02
TRAPPC4Q9Y296 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14.91□□□□□ -0.02
TRAPPC4Q9Y296 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAPPC4Q9Y296 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRAPPC4Q9Y296 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRAPPC4Q9Y296 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAPPC4Q9Y296 GCK-202ENST00000345378 2421 ntTSL 2 BASIC14.91□□□□□ -0.02
TRAPPC4Q9Y296 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAPPC4Q9Y296 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAPPC4Q9Y296 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRAPPC4Q9Y296 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAPPC4Q9Y296 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
TRAPPC4Q9Y296 NEK7-201ENST00000367383 586 ntTSL 2 BASIC14.91□□□□□ -0.02
TRAPPC4Q9Y296 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAPPC4Q9Y296 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.91□□□□□ -0.02
TRAPPC4Q9Y296 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
TRAPPC4Q9Y296 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
TRAPPC4Q9Y296 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC14.91□□□□□ -0.02
TRAPPC4Q9Y296 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
TRAPPC4Q9Y296 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRAPPC4Q9Y296 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.91□□□□□ -0.02
TRAPPC4Q9Y296 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAPPC4Q9Y296 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRAPPC4Q9Y296 AC023157.3-201ENST00000619086 2088 ntBASIC14.91□□□□□ -0.02
TRAPPC4Q9Y296 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAPPC4Q9Y296 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
TRAPPC4Q9Y296 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRAPPC4Q9Y296 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAPPC4Q9Y296 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
TRAPPC4Q9Y296 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.91□□□□□ -0.02
TRAPPC4Q9Y296 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
TRAPPC4Q9Y296 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAPPC4Q9Y296 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.9□□□□□ -0.02
TRAPPC4Q9Y296 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAPPC4Q9Y296 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.9□□□□□ -0.02
TRAPPC4Q9Y296 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAPPC4Q9Y296 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
TRAPPC4Q9Y296 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAPPC4Q9Y296 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
TRAPPC4Q9Y296 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAPPC4Q9Y296 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC14.9□□□□□ -0.02
TRAPPC4Q9Y296 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
TRAPPC4Q9Y296 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
TRAPPC4Q9Y296 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAPPC4Q9Y296 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
TRAPPC4Q9Y296 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAPPC4Q9Y296 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAPPC4Q9Y296 AC010491.1-201ENST00000563101 2797 ntBASIC14.9□□□□□ -0.02
TRAPPC4Q9Y296 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
TRAPPC4Q9Y296 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRAPPC4Q9Y296 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAPPC4Q9Y296 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRAPPC4Q9Y296 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC14.9□□□□□ -0.02
TRAPPC4Q9Y296 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAPPC4Q9Y296 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC14.9□□□□□ -0.02
TRAPPC4Q9Y296 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAPPC4Q9Y296 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAPPC4Q9Y296 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAPPC4Q9Y296 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAPPC4Q9Y296 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAPPC4Q9Y296 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRAPPC4Q9Y296 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.9□□□□□ -0.02
TRAPPC4Q9Y296 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAPPC4Q9Y296 AC138035.3-201ENST00000622706 2791 ntBASIC14.9□□□□□ -0.02
TRAPPC4Q9Y296 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAPPC4Q9Y296 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAPPC4Q9Y296 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAPPC4Q9Y296 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
TRAPPC4Q9Y296 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
TRAPPC4Q9Y296 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.89□□□□□ -0.03
TRAPPC4Q9Y296 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAPPC4Q9Y296 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
TRAPPC4Q9Y296 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC14.89□□□□□ -0.03
TRAPPC4Q9Y296 PCGF3-213ENST00000620529 1899 ntBASIC14.89□□□□□ -0.03
TRAPPC4Q9Y296 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAPPC4Q9Y296 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAPPC4Q9Y296 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
TRAPPC4Q9Y296 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAPPC4Q9Y296 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAPPC4Q9Y296 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC14.89□□□□□ -0.03
TRAPPC4Q9Y296 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.89□□□□□ -0.03
TRAPPC4Q9Y296 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.89□□□□□ -0.03
TRAPPC4Q9Y296 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC14.89□□□□□ -0.03
TRAPPC4Q9Y296 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
TRAPPC4Q9Y296 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC14.89□□□□□ -0.03
TRAPPC4Q9Y296 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC14.89□□□□□ -0.03
TRAPPC4Q9Y296 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAPPC4Q9Y296 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC14.89□□□□□ -0.03
TRAPPC4Q9Y296 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAPPC4Q9Y296 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC14.89□□□□□ -0.03
TRAPPC4Q9Y296 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
TRAPPC4Q9Y296 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAPPC4Q9Y296 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAPPC4Q9Y296 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms