Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CTSFQ9UBX1 IMPDH1P4-201ENST00000445028 1534 ntBASIC15.23■□□□□ 0.03
CTSFQ9UBX1 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CTSFQ9UBX1 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CTSFQ9UBX1 REXO1L8P-201ENST00000604378 1897 ntBASIC15.23■□□□□ 0.03
CTSFQ9UBX1 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.23■□□□□ 0.03
CTSFQ9UBX1 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CTSFQ9UBX1 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC15.23■□□□□ 0.03
CTSFQ9UBX1 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CTSFQ9UBX1 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CTSFQ9UBX1 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.23■□□□□ 0.03
CTSFQ9UBX1 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CTSFQ9UBX1 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.23■□□□□ 0.03
CTSFQ9UBX1 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CTSFQ9UBX1 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.23■□□□□ 0.03
CTSFQ9UBX1 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC15.23■□□□□ 0.03
CTSFQ9UBX1 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
CTSFQ9UBX1 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC15.23■□□□□ 0.03
CTSFQ9UBX1 TMPRSS11CP-201ENST00000453277 683 ntBASIC15.23■□□□□ 0.03
CTSFQ9UBX1 AL139010.1-201ENST00000454878 894 ntBASIC15.23■□□□□ 0.03
CTSFQ9UBX1 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CTSFQ9UBX1 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CTSFQ9UBX1 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CTSFQ9UBX1 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC15.23■□□□□ 0.03
CTSFQ9UBX1 STOM-203ENST00000538954 1257 ntTSL 5 BASIC15.23■□□□□ 0.03
CTSFQ9UBX1 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC15.23■□□□□ 0.03
CTSFQ9UBX1 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.23■□□□□ 0.03
CTSFQ9UBX1 AC009407.1-201ENST00000568958 598 ntBASIC15.23■□□□□ 0.03
CTSFQ9UBX1 PRR29-209ENST00000582540 967 ntTSL 2 BASIC15.23■□□□□ 0.03
CTSFQ9UBX1 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC15.23■□□□□ 0.03
CTSFQ9UBX1 AC008738.7-201ENST00000609744 511 ntBASIC15.23■□□□□ 0.03
CTSFQ9UBX1 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC15.23■□□□□ 0.03
CTSFQ9UBX1 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
CTSFQ9UBX1 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CTSFQ9UBX1 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC15.23■□□□□ 0.03
CTSFQ9UBX1 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.23■□□□□ 0.03
CTSFQ9UBX1 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CTSFQ9UBX1 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC15.23■□□□□ 0.03
CTSFQ9UBX1 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CTSFQ9UBX1 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CTSFQ9UBX1 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CTSFQ9UBX1 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.23■□□□□ 0.03
CTSFQ9UBX1 AL592424.1-201ENST00000563624 1536 ntBASIC15.22■□□□□ 0.03
CTSFQ9UBX1 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.22■□□□□ 0.03
CTSFQ9UBX1 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CTSFQ9UBX1 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CTSFQ9UBX1 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CTSFQ9UBX1 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CTSFQ9UBX1 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.22■□□□□ 0.03
CTSFQ9UBX1 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
CTSFQ9UBX1 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CTSFQ9UBX1 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CTSFQ9UBX1 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CTSFQ9UBX1 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CTSFQ9UBX1 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CTSFQ9UBX1 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CTSFQ9UBX1 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CTSFQ9UBX1 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CTSFQ9UBX1 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.22■□□□□ 0.03
CTSFQ9UBX1 AL512361.1-201ENST00000554200 418 ntBASIC15.22■□□□□ 0.03
CTSFQ9UBX1 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC15.22■□□□□ 0.03
CTSFQ9UBX1 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC15.22■□□□□ 0.03
CTSFQ9UBX1 PAM16-215ENST00000577031 548 ntTSL 4 BASIC15.22■□□□□ 0.03
CTSFQ9UBX1 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC15.22■□□□□ 0.03
CTSFQ9UBX1 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CTSFQ9UBX1 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CTSFQ9UBX1 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.22■□□□□ 0.03
CTSFQ9UBX1 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CTSFQ9UBX1 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.22■□□□□ 0.03
CTSFQ9UBX1 AL136982.4-201ENST00000437689 1740 ntBASIC15.22■□□□□ 0.03
CTSFQ9UBX1 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.22■□□□□ 0.03
CTSFQ9UBX1 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CTSFQ9UBX1 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CTSFQ9UBX1 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CTSFQ9UBX1 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CTSFQ9UBX1 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CTSFQ9UBX1 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.22■□□□□ 0.03
CTSFQ9UBX1 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CTSFQ9UBX1 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CTSFQ9UBX1 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.22■□□□□ 0.03
CTSFQ9UBX1 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CTSFQ9UBX1 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.21■□□□□ 0.03
CTSFQ9UBX1 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.21■□□□□ 0.03
CTSFQ9UBX1 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CTSFQ9UBX1 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CTSFQ9UBX1 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
CTSFQ9UBX1 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CTSFQ9UBX1 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CTSFQ9UBX1 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CTSFQ9UBX1 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CTSFQ9UBX1 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC15.21■□□□□ 0.03
CTSFQ9UBX1 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC15.21■□□□□ 0.03
CTSFQ9UBX1 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CTSFQ9UBX1 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CTSFQ9UBX1 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.21■□□□□ 0.03
CTSFQ9UBX1 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CTSFQ9UBX1 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CTSFQ9UBX1 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CTSFQ9UBX1 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CTSFQ9UBX1 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms