Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.29■□□□□ 0.04
THUMPD1Q9NXG2 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC15.29■□□□□ 0.04
THUMPD1Q9NXG2 AC148477.8-201ENST00000624298 468 ntBASIC15.29■□□□□ 0.04
THUMPD1Q9NXG2 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.29■□□□□ 0.04
THUMPD1Q9NXG2 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
THUMPD1Q9NXG2 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.29■□□□□ 0.04
THUMPD1Q9NXG2 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
THUMPD1Q9NXG2 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
THUMPD1Q9NXG2 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
THUMPD1Q9NXG2 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
THUMPD1Q9NXG2 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
THUMPD1Q9NXG2 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
THUMPD1Q9NXG2 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
THUMPD1Q9NXG2 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
THUMPD1Q9NXG2 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.29■□□□□ 0.04
THUMPD1Q9NXG2 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
THUMPD1Q9NXG2 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
THUMPD1Q9NXG2 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
THUMPD1Q9NXG2 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
THUMPD1Q9NXG2 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.29■□□□□ 0.04
THUMPD1Q9NXG2 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.29■□□□□ 0.04
THUMPD1Q9NXG2 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
THUMPD1Q9NXG2 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.28■□□□□ 0.04
THUMPD1Q9NXG2 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
THUMPD1Q9NXG2 AC092919.2-201ENST00000623631 1645 ntBASIC15.28■□□□□ 0.04
THUMPD1Q9NXG2 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.28■□□□□ 0.04
THUMPD1Q9NXG2 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
THUMPD1Q9NXG2 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.28■□□□□ 0.04
THUMPD1Q9NXG2 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.28■□□□□ 0.04
THUMPD1Q9NXG2 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
THUMPD1Q9NXG2 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
THUMPD1Q9NXG2 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
THUMPD1Q9NXG2 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC15.28■□□□□ 0.04
THUMPD1Q9NXG2 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC15.28■□□□□ 0.04
THUMPD1Q9NXG2 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
THUMPD1Q9NXG2 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.28■□□□□ 0.04
THUMPD1Q9NXG2 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
THUMPD1Q9NXG2 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.28■□□□□ 0.04
THUMPD1Q9NXG2 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
THUMPD1Q9NXG2 RN7SL510P-201ENST00000581311 263 ntBASIC15.28■□□□□ 0.04
THUMPD1Q9NXG2 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
THUMPD1Q9NXG2 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
THUMPD1Q9NXG2 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
THUMPD1Q9NXG2 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
THUMPD1Q9NXG2 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.28■□□□□ 0.04
THUMPD1Q9NXG2 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.28■□□□□ 0.04
THUMPD1Q9NXG2 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
THUMPD1Q9NXG2 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
THUMPD1Q9NXG2 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
THUMPD1Q9NXG2 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
THUMPD1Q9NXG2 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
THUMPD1Q9NXG2 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
THUMPD1Q9NXG2 AP002414.2-201ENST00000591780 3365 ntBASIC15.28■□□□□ 0.04
THUMPD1Q9NXG2 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
THUMPD1Q9NXG2 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.28■□□□□ 0.04
THUMPD1Q9NXG2 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
THUMPD1Q9NXG2 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
THUMPD1Q9NXG2 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
THUMPD1Q9NXG2 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
THUMPD1Q9NXG2 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
THUMPD1Q9NXG2 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
THUMPD1Q9NXG2 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.27■□□□□ 0.04
THUMPD1Q9NXG2 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
THUMPD1Q9NXG2 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
THUMPD1Q9NXG2 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
THUMPD1Q9NXG2 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
THUMPD1Q9NXG2 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
THUMPD1Q9NXG2 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
THUMPD1Q9NXG2 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
THUMPD1Q9NXG2 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
THUMPD1Q9NXG2 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
THUMPD1Q9NXG2 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
THUMPD1Q9NXG2 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
THUMPD1Q9NXG2 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
THUMPD1Q9NXG2 RHOQP3-201ENST00000437982 621 ntBASIC15.27■□□□□ 0.04
THUMPD1Q9NXG2 AC098831.1-202ENST00000438821 336 ntBASIC15.27■□□□□ 0.04
THUMPD1Q9NXG2 AC093724.1-201ENST00000448659 1027 ntBASIC15.27■□□□□ 0.04
THUMPD1Q9NXG2 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.27■□□□□ 0.04
THUMPD1Q9NXG2 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.27■□□□□ 0.04
THUMPD1Q9NXG2 AL662844.1-201ENST00000546340 181 ntBASIC15.27■□□□□ 0.04
THUMPD1Q9NXG2 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.27■□□□□ 0.04
THUMPD1Q9NXG2 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15.27■□□□□ 0.04
THUMPD1Q9NXG2 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
THUMPD1Q9NXG2 AL009183.1-201ENST00000603760 355 ntBASIC15.27■□□□□ 0.04
THUMPD1Q9NXG2 AC023141.13-201ENST00000604991 943 ntBASIC15.27■□□□□ 0.04
THUMPD1Q9NXG2 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.27■□□□□ 0.04
THUMPD1Q9NXG2 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.27■□□□□ 0.03
THUMPD1Q9NXG2 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.27■□□□□ 0.03
THUMPD1Q9NXG2 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
THUMPD1Q9NXG2 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.27■□□□□ 0.03
THUMPD1Q9NXG2 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.27■□□□□ 0.03
THUMPD1Q9NXG2 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
THUMPD1Q9NXG2 PPT1-215ENST00000641471 2368 ntBASIC15.27■□□□□ 0.03
THUMPD1Q9NXG2 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
THUMPD1Q9NXG2 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
THUMPD1Q9NXG2 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
THUMPD1Q9NXG2 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
THUMPD1Q9NXG2 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
THUMPD1Q9NXG2 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.27■□□□□ 0.03
THUMPD1Q9NXG2 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.27■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms