Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CD248Q9HCU0 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD248Q9HCU0 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD248Q9HCU0 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD248Q9HCU0 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CD248Q9HCU0 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC17.1■□□□□ 0.33
CD248Q9HCU0 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD248Q9HCU0 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD248Q9HCU0 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD248Q9HCU0 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC17.1■□□□□ 0.33
CD248Q9HCU0 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC17.1■□□□□ 0.33
CD248Q9HCU0 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.1■□□□□ 0.33
CD248Q9HCU0 RN7SL589P-201ENST00000481268 310 ntBASIC17.1■□□□□ 0.33
CD248Q9HCU0 AC069335.1-201ENST00000489972 472 ntBASIC17.1■□□□□ 0.33
CD248Q9HCU0 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC17.1■□□□□ 0.33
CD248Q9HCU0 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CD248Q9HCU0 AL512356.2-201ENST00000546955 174 ntBASIC17.1■□□□□ 0.33
CD248Q9HCU0 AL135744.1-201ENST00000565098 629 ntBASIC17.1■□□□□ 0.33
CD248Q9HCU0 RARRES2P8-201ENST00000566335 367 ntBASIC17.1■□□□□ 0.33
CD248Q9HCU0 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CD248Q9HCU0 AC011467.4-201ENST00000594891 528 ntBASIC17.1■□□□□ 0.33
CD248Q9HCU0 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD248Q9HCU0 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD248Q9HCU0 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD248Q9HCU0 AKAP8P1-201ENST00000434743 1349 ntBASIC17.1■□□□□ 0.33
CD248Q9HCU0 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.1■□□□□ 0.33
CD248Q9HCU0 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.1■□□□□ 0.33
CD248Q9HCU0 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.1■□□□□ 0.33
CD248Q9HCU0 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CD248Q9HCU0 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD248Q9HCU0 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD248Q9HCU0 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC17.1■□□□□ 0.33
CD248Q9HCU0 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD248Q9HCU0 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD248Q9HCU0 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC17.1■□□□□ 0.33
CD248Q9HCU0 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC17.1■□□□□ 0.33
CD248Q9HCU0 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CD248Q9HCU0 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD248Q9HCU0 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD248Q9HCU0 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD248Q9HCU0 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CD248Q9HCU0 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD248Q9HCU0 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CD248Q9HCU0 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD248Q9HCU0 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CD248Q9HCU0 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD248Q9HCU0 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CD248Q9HCU0 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CD248Q9HCU0 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CD248Q9HCU0 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CD248Q9HCU0 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CD248Q9HCU0 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CD248Q9HCU0 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CD248Q9HCU0 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CD248Q9HCU0 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CD248Q9HCU0 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.09■□□□□ 0.33
CD248Q9HCU0 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.09■□□□□ 0.33
CD248Q9HCU0 SPDYE11-202ENST00000450699 704 ntBASIC17.09■□□□□ 0.33
CD248Q9HCU0 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CD248Q9HCU0 DUX4L17-201ENST00000557360 1267 ntBASIC17.09■□□□□ 0.33
CD248Q9HCU0 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.09■□□□□ 0.33
CD248Q9HCU0 SPDYE9P-201ENST00000570642 692 ntBASIC17.09■□□□□ 0.33
CD248Q9HCU0 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.09■□□□□ 0.33
CD248Q9HCU0 SPDYE10P-202ENST00000612005 668 ntBASIC17.09■□□□□ 0.33
CD248Q9HCU0 SPDYE8P-202ENST00000612377 668 ntBASIC17.09■□□□□ 0.33
CD248Q9HCU0 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CD248Q9HCU0 AC084121.4-201ENST00000641598 221 ntBASIC17.09■□□□□ 0.33
CD248Q9HCU0 AF228730.8-201ENST00000642140 221 ntBASIC17.09■□□□□ 0.33
CD248Q9HCU0 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CD248Q9HCU0 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CD248Q9HCU0 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
CD248Q9HCU0 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CD248Q9HCU0 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CD248Q9HCU0 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CD248Q9HCU0 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CD248Q9HCU0 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.09■□□□□ 0.33
CD248Q9HCU0 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CD248Q9HCU0 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.09■□□□□ 0.33
CD248Q9HCU0 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CD248Q9HCU0 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CD248Q9HCU0 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CD248Q9HCU0 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CD248Q9HCU0 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CD248Q9HCU0 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CD248Q9HCU0 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CD248Q9HCU0 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CD248Q9HCU0 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CD248Q9HCU0 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CD248Q9HCU0 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
CD248Q9HCU0 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CD248Q9HCU0 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CD248Q9HCU0 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CD248Q9HCU0 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
CD248Q9HCU0 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CD248Q9HCU0 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CD248Q9HCU0 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CD248Q9HCU0 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC17.08■□□□□ 0.33
CD248Q9HCU0 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CD248Q9HCU0 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CD248Q9HCU0 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms