Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
SND1-IT1Q9HBX3 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SND1-IT1Q9HBX3 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SND1-IT1Q9HBX3 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
SND1-IT1Q9HBX3 FUOM-202ENST00000368551 628 ntTSL 3 BASIC10.92□□□□□ -0.66
SND1-IT1Q9HBX3 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
SND1-IT1Q9HBX3 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SND1-IT1Q9HBX3 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
SND1-IT1Q9HBX3 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
SND1-IT1Q9HBX3 CHCHD2P8-201ENST00000429873 447 ntBASIC10.92□□□□□ -0.66
SND1-IT1Q9HBX3 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC10.92□□□□□ -0.66
SND1-IT1Q9HBX3 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
SND1-IT1Q9HBX3 BX276092.5-203ENST00000456199 560 ntBASIC10.92□□□□□ -0.66
SND1-IT1Q9HBX3 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
SND1-IT1Q9HBX3 AC022616.7-201ENST00000525383 220 ntBASIC10.92□□□□□ -0.66
SND1-IT1Q9HBX3 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC10.92□□□□□ -0.66
SND1-IT1Q9HBX3 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC10.92□□□□□ -0.66
SND1-IT1Q9HBX3 NTF6B-201ENST00000591913 560 ntBASIC10.92□□□□□ -0.66
SND1-IT1Q9HBX3 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SND1-IT1Q9HBX3 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC10.92□□□□□ -0.66
SND1-IT1Q9HBX3 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
SND1-IT1Q9HBX3 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC10.92□□□□□ -0.66
SND1-IT1Q9HBX3 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SND1-IT1Q9HBX3 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC10.92□□□□□ -0.66
SND1-IT1Q9HBX3 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
SND1-IT1Q9HBX3 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
SND1-IT1Q9HBX3 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC10.92□□□□□ -0.66
SND1-IT1Q9HBX3 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC10.92□□□□□ -0.66
SND1-IT1Q9HBX3 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SND1-IT1Q9HBX3 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
SND1-IT1Q9HBX3 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SND1-IT1Q9HBX3 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
SND1-IT1Q9HBX3 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
SND1-IT1Q9HBX3 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC10.92□□□□□ -0.66
SND1-IT1Q9HBX3 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
SND1-IT1Q9HBX3 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC10.92□□□□□ -0.66
SND1-IT1Q9HBX3 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
SND1-IT1Q9HBX3 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
SND1-IT1Q9HBX3 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
SND1-IT1Q9HBX3 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
SND1-IT1Q9HBX3 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
SND1-IT1Q9HBX3 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
SND1-IT1Q9HBX3 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
SND1-IT1Q9HBX3 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC10.91□□□□□ -0.66
SND1-IT1Q9HBX3 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SND1-IT1Q9HBX3 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC10.91□□□□□ -0.66
SND1-IT1Q9HBX3 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC10.91□□□□□ -0.66
SND1-IT1Q9HBX3 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
SND1-IT1Q9HBX3 SSR4P1-203ENST00000599569 2260 ntBASIC10.91□□□□□ -0.66
SND1-IT1Q9HBX3 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
SND1-IT1Q9HBX3 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC10.91□□□□□ -0.66
SND1-IT1Q9HBX3 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
SND1-IT1Q9HBX3 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC10.91□□□□□ -0.66
SND1-IT1Q9HBX3 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC10.91□□□□□ -0.66
SND1-IT1Q9HBX3 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
SND1-IT1Q9HBX3 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
SND1-IT1Q9HBX3 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC10.91□□□□□ -0.66
SND1-IT1Q9HBX3 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
SND1-IT1Q9HBX3 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
SND1-IT1Q9HBX3 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC10.91□□□□□ -0.66
SND1-IT1Q9HBX3 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SND1-IT1Q9HBX3 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC10.91□□□□□ -0.66
SND1-IT1Q9HBX3 AL136038.3-201ENST00000561909 1096 ntBASIC10.91□□□□□ -0.66
SND1-IT1Q9HBX3 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC10.91□□□□□ -0.66
SND1-IT1Q9HBX3 Z69720.1-201ENST00000601483 472 ntBASIC10.91□□□□□ -0.66
SND1-IT1Q9HBX3 AL121672.3-201ENST00000608644 468 ntBASIC10.91□□□□□ -0.66
SND1-IT1Q9HBX3 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC10.91□□□□□ -0.66
SND1-IT1Q9HBX3 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC10.91□□□□□ -0.66
SND1-IT1Q9HBX3 AP000867.4-201ENST00000641616 219 ntBASIC10.91□□□□□ -0.66
SND1-IT1Q9HBX3 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
SND1-IT1Q9HBX3 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SND1-IT1Q9HBX3 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC10.91□□□□□ -0.66
SND1-IT1Q9HBX3 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SND1-IT1Q9HBX3 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
SND1-IT1Q9HBX3 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC10.91□□□□□ -0.66
SND1-IT1Q9HBX3 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC10.91□□□□□ -0.66
SND1-IT1Q9HBX3 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
SND1-IT1Q9HBX3 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC10.91□□□□□ -0.66
SND1-IT1Q9HBX3 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC10.91□□□□□ -0.66
SND1-IT1Q9HBX3 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC10.91□□□□□ -0.66
SND1-IT1Q9HBX3 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
SND1-IT1Q9HBX3 SIGLEC16-201ENST00000599858 1437 ntBASIC10.91□□□□□ -0.66
SND1-IT1Q9HBX3 AL031731.1-201ENST00000642131 2094 ntBASIC10.91□□□□□ -0.66
SND1-IT1Q9HBX3 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SND1-IT1Q9HBX3 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
SND1-IT1Q9HBX3 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
SND1-IT1Q9HBX3 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC10.91□□□□□ -0.66
SND1-IT1Q9HBX3 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SND1-IT1Q9HBX3 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC10.91□□□□□ -0.66
SND1-IT1Q9HBX3 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
SND1-IT1Q9HBX3 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC10.9□□□□□ -0.66
SND1-IT1Q9HBX3 TOP3BP1-201ENST00000420768 1380 ntBASIC10.9□□□□□ -0.66
SND1-IT1Q9HBX3 AC233702.3-201ENST00000578656 1387 ntBASIC10.9□□□□□ -0.66
SND1-IT1Q9HBX3 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SND1-IT1Q9HBX3 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
SND1-IT1Q9HBX3 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
SND1-IT1Q9HBX3 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
SND1-IT1Q9HBX3 AC006486.2-201ENST00000624246 2199 ntBASIC10.9□□□□□ -0.66
SND1-IT1Q9HBX3 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
SND1-IT1Q9HBX3 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC10.9□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms