Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC17.4■□□□□ 0.38
NXF3Q9H4D5 SRP9-204ENST00000619790 377 ntTSL 2 BASIC17.4■□□□□ 0.38
NXF3Q9H4D5 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
NXF3Q9H4D5 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NXF3Q9H4D5 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NXF3Q9H4D5 AC134407.2-201ENST00000625089 1978 ntBASIC17.4■□□□□ 0.38
NXF3Q9H4D5 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NXF3Q9H4D5 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NXF3Q9H4D5 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NXF3Q9H4D5 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
NXF3Q9H4D5 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NXF3Q9H4D5 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NXF3Q9H4D5 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NXF3Q9H4D5 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
NXF3Q9H4D5 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.39■□□□□ 0.38
NXF3Q9H4D5 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
NXF3Q9H4D5 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.39■□□□□ 0.38
NXF3Q9H4D5 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
NXF3Q9H4D5 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NXF3Q9H4D5 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
NXF3Q9H4D5 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
NXF3Q9H4D5 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NXF3Q9H4D5 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NXF3Q9H4D5 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.39■□□□□ 0.37
NXF3Q9H4D5 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NXF3Q9H4D5 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.39■□□□□ 0.37
NXF3Q9H4D5 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
NXF3Q9H4D5 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
NXF3Q9H4D5 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NXF3Q9H4D5 AL353779.1-201ENST00000434793 351 ntBASIC17.39■□□□□ 0.37
NXF3Q9H4D5 AC093004.1-201ENST00000508850 424 ntBASIC17.39■□□□□ 0.37
NXF3Q9H4D5 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC17.39■□□□□ 0.37
NXF3Q9H4D5 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC17.39■□□□□ 0.37
NXF3Q9H4D5 SUOX-214ENST00000551841 906 ntTSL 3 BASIC17.39■□□□□ 0.37
NXF3Q9H4D5 CHCHD2P3-201ENST00000603038 451 ntBASIC17.39■□□□□ 0.37
NXF3Q9H4D5 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC17.39■□□□□ 0.37
NXF3Q9H4D5 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NXF3Q9H4D5 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NXF3Q9H4D5 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NXF3Q9H4D5 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
NXF3Q9H4D5 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
NXF3Q9H4D5 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
NXF3Q9H4D5 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
NXF3Q9H4D5 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NXF3Q9H4D5 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.39■□□□□ 0.37
NXF3Q9H4D5 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
NXF3Q9H4D5 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
NXF3Q9H4D5 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.39■□□□□ 0.37
NXF3Q9H4D5 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NXF3Q9H4D5 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NXF3Q9H4D5 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
NXF3Q9H4D5 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.39■□□□□ 0.37
NXF3Q9H4D5 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.39■□□□□ 0.37
NXF3Q9H4D5 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NXF3Q9H4D5 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NXF3Q9H4D5 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NXF3Q9H4D5 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NXF3Q9H4D5 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
NXF3Q9H4D5 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.38■□□□□ 0.37
NXF3Q9H4D5 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
NXF3Q9H4D5 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.38■□□□□ 0.37
NXF3Q9H4D5 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NXF3Q9H4D5 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NXF3Q9H4D5 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NXF3Q9H4D5 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
NXF3Q9H4D5 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
NXF3Q9H4D5 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NXF3Q9H4D5 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NXF3Q9H4D5 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
NXF3Q9H4D5 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC17.38■□□□□ 0.37
NXF3Q9H4D5 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC17.38■□□□□ 0.37
NXF3Q9H4D5 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
NXF3Q9H4D5 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NXF3Q9H4D5 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC17.38■□□□□ 0.37
NXF3Q9H4D5 GAPDHP21-201ENST00000450301 1010 ntBASIC17.38■□□□□ 0.37
NXF3Q9H4D5 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC17.38■□□□□ 0.37
NXF3Q9H4D5 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC17.38■□□□□ 0.37
NXF3Q9H4D5 CD81-207ENST00000481687 890 ntTSL 2 BASIC17.38■□□□□ 0.37
NXF3Q9H4D5 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
NXF3Q9H4D5 FTH1-202ENST00000526640 786 ntTSL 2 BASIC17.38■□□□□ 0.37
NXF3Q9H4D5 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC17.38■□□□□ 0.37
NXF3Q9H4D5 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC17.38■□□□□ 0.37
NXF3Q9H4D5 AC023310.3-201ENST00000557027 670 ntBASIC17.38■□□□□ 0.37
NXF3Q9H4D5 AC100756.1-201ENST00000562736 682 ntBASIC17.38■□□□□ 0.37
NXF3Q9H4D5 WASH4P-201ENST00000564273 1246 ntBASIC17.38■□□□□ 0.37
NXF3Q9H4D5 AC138749.3-201ENST00000567691 622 ntBASIC17.38■□□□□ 0.37
NXF3Q9H4D5 AC116165.1-201ENST00000611806 668 ntBASIC17.38■□□□□ 0.37
NXF3Q9H4D5 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NXF3Q9H4D5 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NXF3Q9H4D5 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NXF3Q9H4D5 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NXF3Q9H4D5 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
NXF3Q9H4D5 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NXF3Q9H4D5 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.38■□□□□ 0.37
NXF3Q9H4D5 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.38■□□□□ 0.37
NXF3Q9H4D5 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.38■□□□□ 0.37
NXF3Q9H4D5 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NXF3Q9H4D5 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
NXF3Q9H4D5 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NXF3Q9H4D5 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms