Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
HIPK3Q9H422 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC17.58■□□□□ 0.4
HIPK3Q9H422 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HIPK3Q9H422 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HIPK3Q9H422 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HIPK3Q9H422 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HIPK3Q9H422 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HIPK3Q9H422 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
HIPK3Q9H422 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC17.58■□□□□ 0.4
HIPK3Q9H422 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HIPK3Q9H422 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
HIPK3Q9H422 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HIPK3Q9H422 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
HIPK3Q9H422 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.57■□□□□ 0.4
HIPK3Q9H422 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.57■□□□□ 0.4
HIPK3Q9H422 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.57■□□□□ 0.4
HIPK3Q9H422 GZMB-202ENST00000382540 816 ntTSL 5 BASIC17.57■□□□□ 0.4
HIPK3Q9H422 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HIPK3Q9H422 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC17.57■□□□□ 0.4
HIPK3Q9H422 AC099548.2-209ENST00000480264 625 ntBASIC17.57■□□□□ 0.4
HIPK3Q9H422 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HIPK3Q9H422 AC108725.1-201ENST00000495472 409 ntBASIC17.57■□□□□ 0.4
HIPK3Q9H422 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HIPK3Q9H422 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
HIPK3Q9H422 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC17.57■□□□□ 0.4
HIPK3Q9H422 AC068587.3-201ENST00000526613 355 ntBASIC17.57■□□□□ 0.4
HIPK3Q9H422 ENPP7P5-201ENST00000541031 1031 ntBASIC17.57■□□□□ 0.4
HIPK3Q9H422 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC17.57■□□□□ 0.4
HIPK3Q9H422 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
HIPK3Q9H422 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC17.57■□□□□ 0.4
HIPK3Q9H422 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC17.57■□□□□ 0.4
HIPK3Q9H422 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
HIPK3Q9H422 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HIPK3Q9H422 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HIPK3Q9H422 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
HIPK3Q9H422 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HIPK3Q9H422 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC17.57■□□□□ 0.4
HIPK3Q9H422 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
HIPK3Q9H422 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.57■□□□□ 0.4
HIPK3Q9H422 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.57■□□□□ 0.4
HIPK3Q9H422 PCDHA12-202ENST00000613593 2588 ntBASIC17.57■□□□□ 0.4
HIPK3Q9H422 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HIPK3Q9H422 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.57■□□□□ 0.4
HIPK3Q9H422 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HIPK3Q9H422 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
HIPK3Q9H422 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
HIPK3Q9H422 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HIPK3Q9H422 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.57■□□□□ 0.4
HIPK3Q9H422 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
HIPK3Q9H422 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HIPK3Q9H422 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HIPK3Q9H422 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
HIPK3Q9H422 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
HIPK3Q9H422 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.56■□□□□ 0.4
HIPK3Q9H422 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.56■□□□□ 0.4
HIPK3Q9H422 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.56■□□□□ 0.4
HIPK3Q9H422 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
HIPK3Q9H422 LINC01144-201ENST00000626198 1710 ntBASIC17.56■□□□□ 0.4
HIPK3Q9H422 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
HIPK3Q9H422 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.56■□□□□ 0.4
HIPK3Q9H422 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HIPK3Q9H422 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
HIPK3Q9H422 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HIPK3Q9H422 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.56■□□□□ 0.4
HIPK3Q9H422 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HIPK3Q9H422 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HIPK3Q9H422 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
HIPK3Q9H422 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HIPK3Q9H422 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HIPK3Q9H422 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HIPK3Q9H422 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC17.56■□□□□ 0.4
HIPK3Q9H422 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC17.56■□□□□ 0.4
HIPK3Q9H422 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HIPK3Q9H422 AP001889.1-201ENST00000525414 633 ntBASIC17.56■□□□□ 0.4
HIPK3Q9H422 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC17.56■□□□□ 0.4
HIPK3Q9H422 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC17.56■□□□□ 0.4
HIPK3Q9H422 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC17.56■□□□□ 0.4
HIPK3Q9H422 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
HIPK3Q9H422 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HIPK3Q9H422 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HIPK3Q9H422 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC17.56■□□□□ 0.4
HIPK3Q9H422 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HIPK3Q9H422 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HIPK3Q9H422 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HIPK3Q9H422 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
HIPK3Q9H422 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.56■□□□□ 0.4
HIPK3Q9H422 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.56■□□□□ 0.4
HIPK3Q9H422 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HIPK3Q9H422 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HIPK3Q9H422 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
HIPK3Q9H422 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.56■□□□□ 0.4
HIPK3Q9H422 AL603756.1-201ENST00000606511 2163 ntBASIC17.56■□□□□ 0.4
HIPK3Q9H422 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HIPK3Q9H422 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HIPK3Q9H422 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
HIPK3Q9H422 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
HIPK3Q9H422 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HIPK3Q9H422 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HIPK3Q9H422 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.55■□□□□ 0.4
HIPK3Q9H422 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms