Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
LIMD2Q9BT23 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
LIMD2Q9BT23 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
LIMD2Q9BT23 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
LIMD2Q9BT23 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC9.74□□□□□ -0.85
LIMD2Q9BT23 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC9.74□□□□□ -0.85
LIMD2Q9BT23 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
LIMD2Q9BT23 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
LIMD2Q9BT23 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC9.74□□□□□ -0.85
LIMD2Q9BT23 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
LIMD2Q9BT23 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC9.74□□□□□ -0.85
LIMD2Q9BT23 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
LIMD2Q9BT23 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC9.74□□□□□ -0.85
LIMD2Q9BT23 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC9.74□□□□□ -0.85
LIMD2Q9BT23 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
LIMD2Q9BT23 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
LIMD2Q9BT23 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
LIMD2Q9BT23 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
LIMD2Q9BT23 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC9.74□□□□□ -0.85
LIMD2Q9BT23 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
LIMD2Q9BT23 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
LIMD2Q9BT23 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC9.74□□□□□ -0.85
LIMD2Q9BT23 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
LIMD2Q9BT23 GRK6P1-201ENST00000400595 1711 ntBASIC9.73□□□□□ -0.85
LIMD2Q9BT23 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC9.73□□□□□ -0.85
LIMD2Q9BT23 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC9.73□□□□□ -0.85
LIMD2Q9BT23 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC9.73□□□□□ -0.85
LIMD2Q9BT23 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
LIMD2Q9BT23 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC9.73□□□□□ -0.85
LIMD2Q9BT23 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC9.73□□□□□ -0.85
LIMD2Q9BT23 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC9.73□□□□□ -0.85
LIMD2Q9BT23 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC9.73□□□□□ -0.85
LIMD2Q9BT23 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
LIMD2Q9BT23 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
LIMD2Q9BT23 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC9.73□□□□□ -0.85
LIMD2Q9BT23 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
LIMD2Q9BT23 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
LIMD2Q9BT23 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC9.73□□□□□ -0.85
LIMD2Q9BT23 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
LIMD2Q9BT23 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
LIMD2Q9BT23 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC9.73□□□□□ -0.85
LIMD2Q9BT23 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC9.73□□□□□ -0.85
LIMD2Q9BT23 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
LIMD2Q9BT23 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
LIMD2Q9BT23 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
LIMD2Q9BT23 HCG4-201ENST00000418983 998 ntBASIC9.73□□□□□ -0.85
LIMD2Q9BT23 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC9.73□□□□□ -0.85
LIMD2Q9BT23 CDK2AP2P3-201ENST00000422476 372 ntBASIC9.73□□□□□ -0.85
LIMD2Q9BT23 FAAHP1-202ENST00000446499 1238 ntBASIC9.73□□□□□ -0.85
LIMD2Q9BT23 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC9.73□□□□□ -0.85
LIMD2Q9BT23 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC9.73□□□□□ -0.85
LIMD2Q9BT23 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
LIMD2Q9BT23 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC9.73□□□□□ -0.85
LIMD2Q9BT23 ETFA-208ENST00000559602 792 ntTSL 3 BASIC9.73□□□□□ -0.85
LIMD2Q9BT23 BMF-207ENST00000559701 630 ntTSL 3 BASIC9.73□□□□□ -0.85
LIMD2Q9BT23 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC9.73□□□□□ -0.85
LIMD2Q9BT23 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
LIMD2Q9BT23 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
LIMD2Q9BT23 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC9.73□□□□□ -0.85
LIMD2Q9BT23 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
LIMD2Q9BT23 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC9.73□□□□□ -0.85
LIMD2Q9BT23 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC9.73□□□□□ -0.85
LIMD2Q9BT23 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
LIMD2Q9BT23 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
LIMD2Q9BT23 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC9.73□□□□□ -0.85
LIMD2Q9BT23 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC9.73□□□□□ -0.85
LIMD2Q9BT23 AC129492.6-201ENST00000611383 1305 ntBASIC9.73□□□□□ -0.85
LIMD2Q9BT23 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC9.73□□□□□ -0.85
LIMD2Q9BT23 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
LIMD2Q9BT23 AC006058.4-201ENST00000624016 1670 ntBASIC9.73□□□□□ -0.85
LIMD2Q9BT23 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
LIMD2Q9BT23 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC9.73□□□□□ -0.85
LIMD2Q9BT23 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC9.73□□□□□ -0.85
LIMD2Q9BT23 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC9.73□□□□□ -0.85
LIMD2Q9BT23 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC9.73□□□□□ -0.85
LIMD2Q9BT23 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
LIMD2Q9BT23 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
LIMD2Q9BT23 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
LIMD2Q9BT23 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
LIMD2Q9BT23 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
LIMD2Q9BT23 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC9.73□□□□□ -0.85
LIMD2Q9BT23 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
LIMD2Q9BT23 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
LIMD2Q9BT23 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
LIMD2Q9BT23 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC9.73□□□□□ -0.85
LIMD2Q9BT23 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
LIMD2Q9BT23 AL353732.1-201ENST00000569618 1459 ntBASIC9.72□□□□□ -0.85
LIMD2Q9BT23 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
LIMD2Q9BT23 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
LIMD2Q9BT23 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
LIMD2Q9BT23 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC9.72□□□□□ -0.85
LIMD2Q9BT23 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
LIMD2Q9BT23 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC9.72□□□□□ -0.85
LIMD2Q9BT23 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC9.72□□□□□ -0.85
LIMD2Q9BT23 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC9.72□□□□□ -0.85
LIMD2Q9BT23 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
LIMD2Q9BT23 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
LIMD2Q9BT23 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
LIMD2Q9BT23 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
LIMD2Q9BT23 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms