Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
YIPF4Q9BSR8 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
YIPF4Q9BSR8 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
YIPF4Q9BSR8 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
YIPF4Q9BSR8 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
YIPF4Q9BSR8 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.31■□□□□ 0.04
YIPF4Q9BSR8 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
YIPF4Q9BSR8 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
YIPF4Q9BSR8 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.31■□□□□ 0.04
YIPF4Q9BSR8 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
YIPF4Q9BSR8 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.31■□□□□ 0.04
YIPF4Q9BSR8 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC15.31■□□□□ 0.04
YIPF4Q9BSR8 AC112482.1-201ENST00000492080 688 ntBASIC15.31■□□□□ 0.04
YIPF4Q9BSR8 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
YIPF4Q9BSR8 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.31■□□□□ 0.04
YIPF4Q9BSR8 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
YIPF4Q9BSR8 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC15.31■□□□□ 0.04
YIPF4Q9BSR8 PDPK2P-202ENST00000562415 1191 ntBASIC15.31■□□□□ 0.04
YIPF4Q9BSR8 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC15.31■□□□□ 0.04
YIPF4Q9BSR8 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
YIPF4Q9BSR8 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.31■□□□□ 0.04
YIPF4Q9BSR8 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC15.31■□□□□ 0.04
YIPF4Q9BSR8 MTDHP5-201ENST00000598980 586 ntBASIC15.31■□□□□ 0.04
YIPF4Q9BSR8 AC068137.2-201ENST00000605408 478 ntBASIC15.31■□□□□ 0.04
YIPF4Q9BSR8 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC15.31■□□□□ 0.04
YIPF4Q9BSR8 AL078644.1-201ENST00000609881 752 ntBASIC15.31■□□□□ 0.04
YIPF4Q9BSR8 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
YIPF4Q9BSR8 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
YIPF4Q9BSR8 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.31■□□□□ 0.04
YIPF4Q9BSR8 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.31■□□□□ 0.04
YIPF4Q9BSR8 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
YIPF4Q9BSR8 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
YIPF4Q9BSR8 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.31■□□□□ 0.04
YIPF4Q9BSR8 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.31■□□□□ 0.04
YIPF4Q9BSR8 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.31■□□□□ 0.04
YIPF4Q9BSR8 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
YIPF4Q9BSR8 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
YIPF4Q9BSR8 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
YIPF4Q9BSR8 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.31■□□□□ 0.04
YIPF4Q9BSR8 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
YIPF4Q9BSR8 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.31■□□□□ 0.04
YIPF4Q9BSR8 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
YIPF4Q9BSR8 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
YIPF4Q9BSR8 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
YIPF4Q9BSR8 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
YIPF4Q9BSR8 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.31■□□□□ 0.04
YIPF4Q9BSR8 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
YIPF4Q9BSR8 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.31■□□□□ 0.04
YIPF4Q9BSR8 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
YIPF4Q9BSR8 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
YIPF4Q9BSR8 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
YIPF4Q9BSR8 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
YIPF4Q9BSR8 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
YIPF4Q9BSR8 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
YIPF4Q9BSR8 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
YIPF4Q9BSR8 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
YIPF4Q9BSR8 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
YIPF4Q9BSR8 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
YIPF4Q9BSR8 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
YIPF4Q9BSR8 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
YIPF4Q9BSR8 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
YIPF4Q9BSR8 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
YIPF4Q9BSR8 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
YIPF4Q9BSR8 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
YIPF4Q9BSR8 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
YIPF4Q9BSR8 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.3■□□□□ 0.04
YIPF4Q9BSR8 AC004832.2-201ENST00000426397 482 ntBASIC15.3■□□□□ 0.04
YIPF4Q9BSR8 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.3■□□□□ 0.04
YIPF4Q9BSR8 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.3■□□□□ 0.04
YIPF4Q9BSR8 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
YIPF4Q9BSR8 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.3■□□□□ 0.04
YIPF4Q9BSR8 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
YIPF4Q9BSR8 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
YIPF4Q9BSR8 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15.3■□□□□ 0.04
YIPF4Q9BSR8 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC15.3■□□□□ 0.04
YIPF4Q9BSR8 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.3■□□□□ 0.04
YIPF4Q9BSR8 AL592424.1-201ENST00000563624 1536 ntBASIC15.3■□□□□ 0.04
YIPF4Q9BSR8 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.3■□□□□ 0.04
YIPF4Q9BSR8 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.3■□□□□ 0.04
YIPF4Q9BSR8 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.3■□□□□ 0.04
YIPF4Q9BSR8 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.3■□□□□ 0.04
YIPF4Q9BSR8 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
YIPF4Q9BSR8 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.3■□□□□ 0.04
YIPF4Q9BSR8 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
YIPF4Q9BSR8 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.3■□□□□ 0.04
YIPF4Q9BSR8 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
YIPF4Q9BSR8 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.3■□□□□ 0.04
YIPF4Q9BSR8 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
YIPF4Q9BSR8 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.3■□□□□ 0.04
YIPF4Q9BSR8 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
YIPF4Q9BSR8 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.3■□□□□ 0.04
YIPF4Q9BSR8 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
YIPF4Q9BSR8 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
YIPF4Q9BSR8 AC103702.1-201ENST00000548801 2630 ntBASIC15.3■□□□□ 0.04
YIPF4Q9BSR8 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.3■□□□□ 0.04
YIPF4Q9BSR8 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
YIPF4Q9BSR8 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
YIPF4Q9BSR8 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
YIPF4Q9BSR8 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.29■□□□□ 0.04
YIPF4Q9BSR8 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms