Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.16■□□□□ 0.34
PAAF1Q9BRP4 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC17.16■□□□□ 0.34
PAAF1Q9BRP4 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.16■□□□□ 0.34
PAAF1Q9BRP4 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PAAF1Q9BRP4 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PAAF1Q9BRP4 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PAAF1Q9BRP4 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PAAF1Q9BRP4 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
PAAF1Q9BRP4 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
PAAF1Q9BRP4 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
PAAF1Q9BRP4 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
PAAF1Q9BRP4 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PAAF1Q9BRP4 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PAAF1Q9BRP4 GRN-214ENST00000589265 1632 ntTSL 5 BASIC17.15■□□□□ 0.34
PAAF1Q9BRP4 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
PAAF1Q9BRP4 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.15■□□□□ 0.34
PAAF1Q9BRP4 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.15■□□□□ 0.34
PAAF1Q9BRP4 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PAAF1Q9BRP4 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PAAF1Q9BRP4 AC098614.1-201ENST00000368528 745 ntBASIC17.15■□□□□ 0.34
PAAF1Q9BRP4 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC17.15■□□□□ 0.34
PAAF1Q9BRP4 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC17.15■□□□□ 0.34
PAAF1Q9BRP4 NME4-207ENST00000450036 985 ntTSL 3 BASIC17.15■□□□□ 0.34
PAAF1Q9BRP4 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC17.15■□□□□ 0.34
PAAF1Q9BRP4 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC17.15■□□□□ 0.34
PAAF1Q9BRP4 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PAAF1Q9BRP4 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC17.15■□□□□ 0.34
PAAF1Q9BRP4 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.15■□□□□ 0.34
PAAF1Q9BRP4 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.15■□□□□ 0.34
PAAF1Q9BRP4 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
PAAF1Q9BRP4 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PAAF1Q9BRP4 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PAAF1Q9BRP4 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PAAF1Q9BRP4 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PAAF1Q9BRP4 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PAAF1Q9BRP4 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.15■□□□□ 0.34
PAAF1Q9BRP4 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PAAF1Q9BRP4 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC17.15■□□□□ 0.34
PAAF1Q9BRP4 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC17.15■□□□□ 0.34
PAAF1Q9BRP4 ZBTB45P2-201ENST00000452245 1531 ntBASIC17.15■□□□□ 0.34
PAAF1Q9BRP4 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PAAF1Q9BRP4 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
PAAF1Q9BRP4 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC17.15■□□□□ 0.34
PAAF1Q9BRP4 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PAAF1Q9BRP4 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PAAF1Q9BRP4 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PAAF1Q9BRP4 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
PAAF1Q9BRP4 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.14■□□□□ 0.33
PAAF1Q9BRP4 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PAAF1Q9BRP4 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.14■□□□□ 0.33
PAAF1Q9BRP4 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PAAF1Q9BRP4 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PAAF1Q9BRP4 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
PAAF1Q9BRP4 AP006294.1-201ENST00000415407 339 ntBASIC17.14■□□□□ 0.33
PAAF1Q9BRP4 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC17.14■□□□□ 0.33
PAAF1Q9BRP4 RN7SL752P-201ENST00000463779 287 ntBASIC17.14■□□□□ 0.33
PAAF1Q9BRP4 FADS2-205ENST00000517839 469 ntTSL 3 BASIC17.14■□□□□ 0.33
PAAF1Q9BRP4 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
PAAF1Q9BRP4 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC17.14■□□□□ 0.33
PAAF1Q9BRP4 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PAAF1Q9BRP4 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC17.14■□□□□ 0.33
PAAF1Q9BRP4 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
PAAF1Q9BRP4 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
PAAF1Q9BRP4 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
PAAF1Q9BRP4 AC099568.2-201ENST00000609194 695 ntBASIC17.14■□□□□ 0.33
PAAF1Q9BRP4 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PAAF1Q9BRP4 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
PAAF1Q9BRP4 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.14■□□□□ 0.33
PAAF1Q9BRP4 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PAAF1Q9BRP4 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PAAF1Q9BRP4 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PAAF1Q9BRP4 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PAAF1Q9BRP4 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
PAAF1Q9BRP4 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PAAF1Q9BRP4 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PAAF1Q9BRP4 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
PAAF1Q9BRP4 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
PAAF1Q9BRP4 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.14■□□□□ 0.33
PAAF1Q9BRP4 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
PAAF1Q9BRP4 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PAAF1Q9BRP4 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
PAAF1Q9BRP4 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.13■□□□□ 0.33
PAAF1Q9BRP4 AC006449.6-201ENST00000612330 2296 ntBASIC17.13■□□□□ 0.33
PAAF1Q9BRP4 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
PAAF1Q9BRP4 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PAAF1Q9BRP4 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PAAF1Q9BRP4 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PAAF1Q9BRP4 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PAAF1Q9BRP4 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PAAF1Q9BRP4 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PAAF1Q9BRP4 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PAAF1Q9BRP4 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PAAF1Q9BRP4 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
PAAF1Q9BRP4 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC17.13■□□□□ 0.33
PAAF1Q9BRP4 TARDBPP1-201ENST00000442013 1203 ntBASIC17.13■□□□□ 0.33
PAAF1Q9BRP4 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC17.13■□□□□ 0.33
PAAF1Q9BRP4 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC17.13■□□□□ 0.33
PAAF1Q9BRP4 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC17.13■□□□□ 0.33
PAAF1Q9BRP4 TIMM17BP1-201ENST00000545713 516 ntBASIC17.13■□□□□ 0.33
PAAF1Q9BRP4 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms