Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TM9SF2Q99805 MIR4515-201ENST00000584082 81 ntBASIC15.11■□□□□ 0.01
TM9SF2Q99805 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
TM9SF2Q99805 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
TM9SF2Q99805 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.11■□□□□ 0.01
TM9SF2Q99805 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TM9SF2Q99805 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TM9SF2Q99805 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TM9SF2Q99805 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
TM9SF2Q99805 AC104640.1-201ENST00000562617 2109 ntBASIC15.11■□□□□ 0.01
TM9SF2Q99805 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.11■□□□□ 0.01
TM9SF2Q99805 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TM9SF2Q99805 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
TM9SF2Q99805 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
TM9SF2Q99805 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC15.11■□□□□ 0.01
TM9SF2Q99805 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.11■□□□□ 0.01
TM9SF2Q99805 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
TM9SF2Q99805 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TM9SF2Q99805 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
TM9SF2Q99805 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TM9SF2Q99805 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
TM9SF2Q99805 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
TM9SF2Q99805 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TM9SF2Q99805 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
TM9SF2Q99805 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TM9SF2Q99805 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
TM9SF2Q99805 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.1■□□□□ 0.01
TM9SF2Q99805 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.1■□□□□ 0.01
TM9SF2Q99805 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TM9SF2Q99805 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.1■□□□□ 0.01
TM9SF2Q99805 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TM9SF2Q99805 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
TM9SF2Q99805 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.1■□□□□ 0.01
TM9SF2Q99805 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.1■□□□□ 0.01
TM9SF2Q99805 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TM9SF2Q99805 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TM9SF2Q99805 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TM9SF2Q99805 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TM9SF2Q99805 CNN2P11-201ENST00000429351 262 ntBASIC15.1■□□□□ 0.01
TM9SF2Q99805 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TM9SF2Q99805 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.1■□□□□ 0.01
TM9SF2Q99805 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
TM9SF2Q99805 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC15.1■□□□□ 0.01
TM9SF2Q99805 AP002490.2-201ENST00000524791 560 ntBASIC15.1■□□□□ 0.01
TM9SF2Q99805 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.1■□□□□ 0.01
TM9SF2Q99805 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC15.1■□□□□ 0.01
TM9SF2Q99805 AP002472.1-201ENST00000577490 586 ntBASIC15.1■□□□□ 0.01
TM9SF2Q99805 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC15.1■□□□□ 0.01
TM9SF2Q99805 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.1■□□□□ 0.01
TM9SF2Q99805 REXO1L3P-201ENST00000622202 1288 ntBASIC15.1■□□□□ 0.01
TM9SF2Q99805 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TM9SF2Q99805 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.1■□□□□ 0.01
TM9SF2Q99805 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.1■□□□□ 0.01
TM9SF2Q99805 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TM9SF2Q99805 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TM9SF2Q99805 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TM9SF2Q99805 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TM9SF2Q99805 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
TM9SF2Q99805 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
TM9SF2Q99805 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TM9SF2Q99805 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.1■□□□□ 0.01
TM9SF2Q99805 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TM9SF2Q99805 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TM9SF2Q99805 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TM9SF2Q99805 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TM9SF2Q99805 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
TM9SF2Q99805 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TM9SF2Q99805 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TM9SF2Q99805 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
TM9SF2Q99805 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
TM9SF2Q99805 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
TM9SF2Q99805 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TM9SF2Q99805 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TM9SF2Q99805 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.09■□□□□ 0.01
TM9SF2Q99805 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
TM9SF2Q99805 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TM9SF2Q99805 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TM9SF2Q99805 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TM9SF2Q99805 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TM9SF2Q99805 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
TM9SF2Q99805 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TM9SF2Q99805 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
TM9SF2Q99805 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.09■□□□□ 0.01
TM9SF2Q99805 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
TM9SF2Q99805 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.09■□□□□ 0.01
TM9SF2Q99805 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
TM9SF2Q99805 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.09■□□□□ 0.01
TM9SF2Q99805 GGCT-205ENST00000409436 954 ntTSL 3 BASIC15.09■□□□□ 0.01
TM9SF2Q99805 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC15.09■□□□□ 0.01
TM9SF2Q99805 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC15.09■□□□□ 0.01
TM9SF2Q99805 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TM9SF2Q99805 AP000344.2-201ENST00000512987 629 ntBASIC15.09■□□□□ 0.01
TM9SF2Q99805 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.09■□□□□ 0.01
TM9SF2Q99805 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC15.09■□□□□ 0.01
TM9SF2Q99805 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.09■□□□□ 0.01
TM9SF2Q99805 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TM9SF2Q99805 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC15.09■□□□□ 0.01
TM9SF2Q99805 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.09■□□□□ 0.01
TM9SF2Q99805 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
TM9SF2Q99805 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms