Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC13.89□□□□□ -0.19
COL12A1Q99715 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
COL12A1Q99715 AC023310.1-201ENST00000554836 735 ntBASIC13.89□□□□□ -0.19
COL12A1Q99715 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
COL12A1Q99715 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
COL12A1Q99715 AC025279.2-201ENST00000569730 653 ntBASIC13.89□□□□□ -0.19
COL12A1Q99715 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
COL12A1Q99715 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC13.89□□□□□ -0.19
COL12A1Q99715 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
COL12A1Q99715 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
COL12A1Q99715 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
COL12A1Q99715 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
COL12A1Q99715 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC13.89□□□□□ -0.19
COL12A1Q99715 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
COL12A1Q99715 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
COL12A1Q99715 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
COL12A1Q99715 BAATP1-201ENST00000412284 1225 ntBASIC13.89□□□□□ -0.19
COL12A1Q99715 AC012362.1-201ENST00000434906 739 ntBASIC13.89□□□□□ -0.19
COL12A1Q99715 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
COL12A1Q99715 PGAM1P5-201ENST00000548011 764 ntBASIC13.89□□□□□ -0.19
COL12A1Q99715 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC13.89□□□□□ -0.19
COL12A1Q99715 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC13.89□□□□□ -0.19
COL12A1Q99715 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC13.89□□□□□ -0.19
COL12A1Q99715 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.89□□□□□ -0.19
COL12A1Q99715 SPIB-207ENST00000597855 564 ntTSL 4 BASIC13.89□□□□□ -0.19
COL12A1Q99715 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC13.89□□□□□ -0.19
COL12A1Q99715 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC13.89□□□□□ -0.19
COL12A1Q99715 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
COL12A1Q99715 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
COL12A1Q99715 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
COL12A1Q99715 RHBDF1P1-201ENST00000427504 1941 ntBASIC13.89□□□□□ -0.19
COL12A1Q99715 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
COL12A1Q99715 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC13.89□□□□□ -0.19
COL12A1Q99715 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC13.89□□□□□ -0.19
COL12A1Q99715 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
COL12A1Q99715 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
COL12A1Q99715 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
COL12A1Q99715 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
COL12A1Q99715 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
COL12A1Q99715 CMC1-204ENST00000423894 549 ntTSL 2 BASIC13.89□□□□□ -0.19
COL12A1Q99715 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC13.89□□□□□ -0.19
COL12A1Q99715 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC13.89□□□□□ -0.19
COL12A1Q99715 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
COL12A1Q99715 AC234782.1-201ENST00000451950 919 ntBASIC13.89□□□□□ -0.19
COL12A1Q99715 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
COL12A1Q99715 AC078819.1-201ENST00000547454 765 ntBASIC13.89□□□□□ -0.19
COL12A1Q99715 AC012085.1-201ENST00000548270 765 ntBASIC13.89□□□□□ -0.19
COL12A1Q99715 AL022344.2-201ENST00000568976 968 ntBASIC13.89□□□□□ -0.19
COL12A1Q99715 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC13.89□□□□□ -0.19
COL12A1Q99715 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC13.89□□□□□ -0.19
COL12A1Q99715 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC13.89□□□□□ -0.19
COL12A1Q99715 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC13.89□□□□□ -0.19
COL12A1Q99715 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
COL12A1Q99715 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
COL12A1Q99715 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
COL12A1Q99715 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
COL12A1Q99715 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC13.88□□□□□ -0.19
COL12A1Q99715 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.88□□□□□ -0.19
COL12A1Q99715 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
COL12A1Q99715 AC026316.1-201ENST00000398900 414 ntBASIC13.88□□□□□ -0.19
COL12A1Q99715 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC13.88□□□□□ -0.19
COL12A1Q99715 AC012618.1-201ENST00000461223 412 ntBASIC13.88□□□□□ -0.19
COL12A1Q99715 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC13.88□□□□□ -0.19
COL12A1Q99715 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC13.88□□□□□ -0.19
COL12A1Q99715 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
COL12A1Q99715 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
COL12A1Q99715 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC13.88□□□□□ -0.19
COL12A1Q99715 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC13.88□□□□□ -0.19
COL12A1Q99715 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC13.88□□□□□ -0.19
COL12A1Q99715 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
COL12A1Q99715 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
COL12A1Q99715 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
COL12A1Q99715 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
COL12A1Q99715 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
COL12A1Q99715 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
COL12A1Q99715 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC13.88□□□□□ -0.19
COL12A1Q99715 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
COL12A1Q99715 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC13.88□□□□□ -0.19
COL12A1Q99715 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.88□□□□□ -0.19
COL12A1Q99715 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.88□□□□□ -0.19
COL12A1Q99715 RNF41-210ENST00000552244 716 ntTSL 3 BASIC13.88□□□□□ -0.19
COL12A1Q99715 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC13.88□□□□□ -0.19
COL12A1Q99715 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC13.88□□□□□ -0.19
COL12A1Q99715 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
COL12A1Q99715 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
COL12A1Q99715 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
COL12A1Q99715 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
COL12A1Q99715 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
COL12A1Q99715 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
COL12A1Q99715 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
COL12A1Q99715 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
COL12A1Q99715 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
COL12A1Q99715 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
COL12A1Q99715 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
COL12A1Q99715 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
COL12A1Q99715 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
COL12A1Q99715 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
COL12A1Q99715 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC13.87□□□□□ -0.19
COL12A1Q99715 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC13.87□□□□□ -0.19
COL12A1Q99715 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms