Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
CCL13Q99616 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
CCL13Q99616 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC13.58□□□□□ -0.23
CCL13Q99616 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
CCL13Q99616 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
CCL13Q99616 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
CCL13Q99616 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
CCL13Q99616 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CCL13Q99616 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC13.58□□□□□ -0.24
CCL13Q99616 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCL13Q99616 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC13.58□□□□□ -0.24
CCL13Q99616 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCL13Q99616 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCL13Q99616 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CCL13Q99616 AL139400.1-201ENST00000366220 510 ntBASIC13.58□□□□□ -0.24
CCL13Q99616 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCL13Q99616 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC13.58□□□□□ -0.24
CCL13Q99616 FAM220BP-201ENST00000377689 816 ntBASIC13.58□□□□□ -0.24
CCL13Q99616 CD81-202ENST00000381036 880 ntTSL 3 BASIC13.58□□□□□ -0.24
CCL13Q99616 RPL30-202ENST00000396070 440 ntTSL 2 BASIC13.58□□□□□ -0.24
CCL13Q99616 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC13.58□□□□□ -0.24
CCL13Q99616 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC13.58□□□□□ -0.24
CCL13Q99616 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCL13Q99616 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CCL13Q99616 AC109322.1-201ENST00000524499 1264 ntBASIC13.58□□□□□ -0.24
CCL13Q99616 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC13.58□□□□□ -0.24
CCL13Q99616 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCL13Q99616 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC13.58□□□□□ -0.24
CCL13Q99616 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCL13Q99616 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCL13Q99616 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
CCL13Q99616 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CCL13Q99616 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
CCL13Q99616 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCL13Q99616 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC13.58□□□□□ -0.24
CCL13Q99616 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCL13Q99616 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
CCL13Q99616 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCL13Q99616 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCL13Q99616 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC13.58□□□□□ -0.24
CCL13Q99616 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCL13Q99616 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC13.58□□□□□ -0.24
CCL13Q99616 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC13.58□□□□□ -0.24
CCL13Q99616 KRT18P28-201ENST00000453838 1332 ntBASIC13.58□□□□□ -0.24
CCL13Q99616 AC068587.6-202ENST00000641839 5619 ntBASIC13.58□□□□□ -0.24
CCL13Q99616 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
CCL13Q99616 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCL13Q99616 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
CCL13Q99616 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CCL13Q99616 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCL13Q99616 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC13.58□□□□□ -0.24
CCL13Q99616 MTHFR-217ENST00000641820 1569 ntBASIC13.58□□□□□ -0.24
CCL13Q99616 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCL13Q99616 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
CCL13Q99616 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC13.58□□□□□ -0.24
CCL13Q99616 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CCL13Q99616 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCL13Q99616 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCL13Q99616 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC13.57□□□□□ -0.24
CCL13Q99616 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
CCL13Q99616 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CCL13Q99616 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
CCL13Q99616 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCL13Q99616 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CCL13Q99616 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCL13Q99616 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
CCL13Q99616 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC13.57□□□□□ -0.24
CCL13Q99616 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCL13Q99616 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCL13Q99616 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
CCL13Q99616 LBH-203ENST00000404397 543 ntTSL 4 BASIC13.57□□□□□ -0.24
CCL13Q99616 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CCL13Q99616 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CCL13Q99616 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC13.57□□□□□ -0.24
CCL13Q99616 METTL21AP1-201ENST00000438852 635 ntBASIC13.57□□□□□ -0.24
CCL13Q99616 SPDYE14P-201ENST00000442619 822 ntBASIC13.57□□□□□ -0.24
CCL13Q99616 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC13.57□□□□□ -0.24
CCL13Q99616 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC13.57□□□□□ -0.24
CCL13Q99616 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC13.57□□□□□ -0.24
CCL13Q99616 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC13.57□□□□□ -0.24
CCL13Q99616 GATD1-206ENST00000526325 756 ntTSL 5 BASIC13.57□□□□□ -0.24
CCL13Q99616 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC13.57□□□□□ -0.24
CCL13Q99616 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCL13Q99616 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC13.57□□□□□ -0.24
CCL13Q99616 AC003101.2-201ENST00000612557 442 ntBASIC13.57□□□□□ -0.24
CCL13Q99616 RAB34-224ENST00000636513 888 ntTSL 5 BASIC13.57□□□□□ -0.24
CCL13Q99616 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCL13Q99616 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCL13Q99616 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC13.57□□□□□ -0.24
CCL13Q99616 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCL13Q99616 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
CCL13Q99616 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC13.57□□□□□ -0.24
CCL13Q99616 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCL13Q99616 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCL13Q99616 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC13.57□□□□□ -0.24
CCL13Q99616 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
CCL13Q99616 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCL13Q99616 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC13.57□□□□□ -0.24
CCL13Q99616 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
CCL13Q99616 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms