Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAB40CQ96S21 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
RAB40CQ96S21 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAB40CQ96S21 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAB40CQ96S21 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAB40CQ96S21 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RAB40CQ96S21 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
RAB40CQ96S21 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAB40CQ96S21 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAB40CQ96S21 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC13.2□□□□□ -0.3
RAB40CQ96S21 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
RAB40CQ96S21 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAB40CQ96S21 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC13.2□□□□□ -0.3
RAB40CQ96S21 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC13.2□□□□□ -0.3
RAB40CQ96S21 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC13.2□□□□□ -0.3
RAB40CQ96S21 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RAB40CQ96S21 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC13.2□□□□□ -0.3
RAB40CQ96S21 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC13.2□□□□□ -0.3
RAB40CQ96S21 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC13.2□□□□□ -0.3
RAB40CQ96S21 BCL10-202ENST00000620248 774 ntTSL 5 BASIC13.2□□□□□ -0.3
RAB40CQ96S21 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAB40CQ96S21 AL009178.2-201ENST00000597278 2719 ntBASIC13.2□□□□□ -0.3
RAB40CQ96S21 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAB40CQ96S21 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
RAB40CQ96S21 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC13.2□□□□□ -0.3
RAB40CQ96S21 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC13.2□□□□□ -0.3
RAB40CQ96S21 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAB40CQ96S21 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAB40CQ96S21 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAB40CQ96S21 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC13.2□□□□□ -0.3
RAB40CQ96S21 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RAB40CQ96S21 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RAB40CQ96S21 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC13.2□□□□□ -0.3
RAB40CQ96S21 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAB40CQ96S21 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.2□□□□□ -0.3
RAB40CQ96S21 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAB40CQ96S21 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RAB40CQ96S21 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
RAB40CQ96S21 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAB40CQ96S21 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAB40CQ96S21 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAB40CQ96S21 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAB40CQ96S21 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAB40CQ96S21 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RAB40CQ96S21 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC13.19□□□□□ -0.3
RAB40CQ96S21 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC13.19□□□□□ -0.3
RAB40CQ96S21 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RAB40CQ96S21 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAB40CQ96S21 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC13.19□□□□□ -0.3
RAB40CQ96S21 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RAB40CQ96S21 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC13.19□□□□□ -0.3
RAB40CQ96S21 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC13.19□□□□□ -0.3
RAB40CQ96S21 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC13.19□□□□□ -0.3
RAB40CQ96S21 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAB40CQ96S21 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC13.19□□□□□ -0.3
RAB40CQ96S21 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAB40CQ96S21 AP003680.1-201ENST00000598970 3660 ntBASIC13.19□□□□□ -0.3
RAB40CQ96S21 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RAB40CQ96S21 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.19□□□□□ -0.3
RAB40CQ96S21 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAB40CQ96S21 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RAB40CQ96S21 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
RAB40CQ96S21 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC13.19□□□□□ -0.3
RAB40CQ96S21 HCG4-201ENST00000418983 998 ntBASIC13.19□□□□□ -0.3
RAB40CQ96S21 DRAXINP1-201ENST00000437611 948 ntBASIC13.19□□□□□ -0.3
RAB40CQ96S21 AP002383.4-201ENST00000442518 975 ntBASIC13.19□□□□□ -0.3
RAB40CQ96S21 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC13.19□□□□□ -0.3
RAB40CQ96S21 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
RAB40CQ96S21 AP002414.4-201ENST00000589764 1148 ntBASIC13.19□□□□□ -0.3
RAB40CQ96S21 IL11-204ENST00000590625 1028 ntTSL 2 BASIC13.19□□□□□ -0.3
RAB40CQ96S21 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC13.19□□□□□ -0.3
RAB40CQ96S21 AL022326.1-202ENST00000641533 845 ntBASIC13.19□□□□□ -0.3
RAB40CQ96S21 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAB40CQ96S21 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
RAB40CQ96S21 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
RAB40CQ96S21 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAB40CQ96S21 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAB40CQ96S21 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
RAB40CQ96S21 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAB40CQ96S21 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC13.19□□□□□ -0.3
RAB40CQ96S21 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
RAB40CQ96S21 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RAB40CQ96S21 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC13.19□□□□□ -0.3
RAB40CQ96S21 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAB40CQ96S21 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
RAB40CQ96S21 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RAB40CQ96S21 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAB40CQ96S21 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAB40CQ96S21 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
RAB40CQ96S21 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RAB40CQ96S21 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC13.19□□□□□ -0.3
RAB40CQ96S21 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC13.19□□□□□ -0.3
RAB40CQ96S21 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAB40CQ96S21 AC138035.3-201ENST00000622706 2791 ntBASIC13.19□□□□□ -0.3
RAB40CQ96S21 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAB40CQ96S21 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAB40CQ96S21 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAB40CQ96S21 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
RAB40CQ96S21 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAB40CQ96S21 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms