Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SYNGAP1Q96PV0 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC18.34■□□□□ 0.53
SYNGAP1Q96PV0 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SYNGAP1Q96PV0 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SYNGAP1Q96PV0 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC18.34■□□□□ 0.53
SYNGAP1Q96PV0 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC18.34■□□□□ 0.53
SYNGAP1Q96PV0 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SYNGAP1Q96PV0 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SYNGAP1Q96PV0 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SYNGAP1Q96PV0 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SYNGAP1Q96PV0 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC18.34■□□□□ 0.53
SYNGAP1Q96PV0 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SYNGAP1Q96PV0 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SYNGAP1Q96PV0 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC18.33■□□□□ 0.53
SYNGAP1Q96PV0 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18.33■□□□□ 0.53
SYNGAP1Q96PV0 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SYNGAP1Q96PV0 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
SYNGAP1Q96PV0 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC18.33■□□□□ 0.53
SYNGAP1Q96PV0 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SYNGAP1Q96PV0 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC18.33■□□□□ 0.53
SYNGAP1Q96PV0 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
SYNGAP1Q96PV0 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SYNGAP1Q96PV0 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SYNGAP1Q96PV0 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC18.33■□□□□ 0.53
SYNGAP1Q96PV0 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC18.33■□□□□ 0.53
SYNGAP1Q96PV0 MXI1-205ENST00000393134 889 ntTSL 2 BASIC18.33■□□□□ 0.53
SYNGAP1Q96PV0 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC18.33■□□□□ 0.53
SYNGAP1Q96PV0 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC18.33■□□□□ 0.53
SYNGAP1Q96PV0 AL589987.1-201ENST00000453380 819 ntBASIC18.33■□□□□ 0.53
SYNGAP1Q96PV0 RN7SL837P-201ENST00000463010 287 ntBASIC18.33■□□□□ 0.53
SYNGAP1Q96PV0 ELK1P1-201ENST00000485699 580 ntBASIC18.33■□□□□ 0.53
SYNGAP1Q96PV0 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC18.33■□□□□ 0.53
SYNGAP1Q96PV0 GLI4-203ENST00000517468 963 ntTSL 5 BASIC18.33■□□□□ 0.53
SYNGAP1Q96PV0 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC18.33■□□□□ 0.53
SYNGAP1Q96PV0 AC123567.1-201ENST00000548294 1261 ntBASIC18.33■□□□□ 0.53
SYNGAP1Q96PV0 RRP7BP-205ENST00000566851 833 ntBASIC18.33■□□□□ 0.53
SYNGAP1Q96PV0 AC093726.1-201ENST00000608064 963 ntBASIC18.33■□□□□ 0.53
SYNGAP1Q96PV0 AC074044.1-201ENST00000609673 707 ntBASIC18.33■□□□□ 0.53
SYNGAP1Q96PV0 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
SYNGAP1Q96PV0 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SYNGAP1Q96PV0 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SYNGAP1Q96PV0 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SYNGAP1Q96PV0 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SYNGAP1Q96PV0 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SYNGAP1Q96PV0 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.52
SYNGAP1Q96PV0 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
SYNGAP1Q96PV0 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC18.33■□□□□ 0.52
SYNGAP1Q96PV0 UBALD1-205ENST00000590891 2641 ntBASIC18.33■□□□□ 0.52
SYNGAP1Q96PV0 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SYNGAP1Q96PV0 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC18.33■□□□□ 0.52
SYNGAP1Q96PV0 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
SYNGAP1Q96PV0 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
SYNGAP1Q96PV0 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SYNGAP1Q96PV0 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
SYNGAP1Q96PV0 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SYNGAP1Q96PV0 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SYNGAP1Q96PV0 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SYNGAP1Q96PV0 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SYNGAP1Q96PV0 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
SYNGAP1Q96PV0 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SYNGAP1Q96PV0 GALT-202ENST00000450095 1280 ntTSL 2 BASIC18.32■□□□□ 0.52
SYNGAP1Q96PV0 RHOA-206ENST00000454011 889 ntTSL 2 BASIC18.32■□□□□ 0.52
SYNGAP1Q96PV0 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SYNGAP1Q96PV0 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC18.32■□□□□ 0.52
SYNGAP1Q96PV0 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SYNGAP1Q96PV0 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC18.32■□□□□ 0.52
SYNGAP1Q96PV0 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC18.32■□□□□ 0.52
SYNGAP1Q96PV0 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
SYNGAP1Q96PV0 AL365330.1-201ENST00000607459 531 ntBASIC18.32■□□□□ 0.52
SYNGAP1Q96PV0 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC18.32■□□□□ 0.52
SYNGAP1Q96PV0 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SYNGAP1Q96PV0 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SYNGAP1Q96PV0 OR6D1P-203ENST00000641209 4860 ntBASIC18.32■□□□□ 0.52
SYNGAP1Q96PV0 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SYNGAP1Q96PV0 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC18.32■□□□□ 0.52
SYNGAP1Q96PV0 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC18.32■□□□□ 0.52
SYNGAP1Q96PV0 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SYNGAP1Q96PV0 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SYNGAP1Q96PV0 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SYNGAP1Q96PV0 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SYNGAP1Q96PV0 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SYNGAP1Q96PV0 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SYNGAP1Q96PV0 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SYNGAP1Q96PV0 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SYNGAP1Q96PV0 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SYNGAP1Q96PV0 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
SYNGAP1Q96PV0 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC18.31■□□□□ 0.52
SYNGAP1Q96PV0 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SYNGAP1Q96PV0 FO393414.2-201ENST00000405153 598 ntBASIC18.31■□□□□ 0.52
SYNGAP1Q96PV0 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC18.31■□□□□ 0.52
SYNGAP1Q96PV0 PTK7-212ENST00000476760 902 ntTSL 2 BASIC18.31■□□□□ 0.52
SYNGAP1Q96PV0 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC18.31■□□□□ 0.52
SYNGAP1Q96PV0 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC18.31■□□□□ 0.52
SYNGAP1Q96PV0 KRT17P8-201ENST00000540749 863 ntBASIC18.31■□□□□ 0.52
SYNGAP1Q96PV0 PAM16-215ENST00000577031 548 ntTSL 4 BASIC18.31■□□□□ 0.52
SYNGAP1Q96PV0 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
SYNGAP1Q96PV0 APOC4-201ENST00000591600 348 ntTSL 3 BASIC18.31■□□□□ 0.52
SYNGAP1Q96PV0 MIR4321-201ENST00000592276 80 ntBASIC18.31■□□□□ 0.52
SYNGAP1Q96PV0 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC18.31■□□□□ 0.52
SYNGAP1Q96PV0 MIR6805-201ENST00000615055 62 ntBASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms