Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC17.1■□□□□ 0.33
CASD1Q96PB1 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CASD1Q96PB1 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CASD1Q96PB1 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CASD1Q96PB1 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CASD1Q96PB1 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.1■□□□□ 0.33
CASD1Q96PB1 AP001282.1-201ENST00000531301 1499 ntBASIC17.1■□□□□ 0.33
CASD1Q96PB1 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.1■□□□□ 0.33
CASD1Q96PB1 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CASD1Q96PB1 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CASD1Q96PB1 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.1■□□□□ 0.33
CASD1Q96PB1 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CASD1Q96PB1 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CASD1Q96PB1 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CASD1Q96PB1 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CASD1Q96PB1 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CASD1Q96PB1 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CASD1Q96PB1 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
CASD1Q96PB1 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CASD1Q96PB1 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CASD1Q96PB1 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CASD1Q96PB1 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CASD1Q96PB1 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CASD1Q96PB1 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CASD1Q96PB1 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CASD1Q96PB1 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CASD1Q96PB1 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC17.09■□□□□ 0.33
CASD1Q96PB1 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC17.09■□□□□ 0.33
CASD1Q96PB1 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC17.09■□□□□ 0.33
CASD1Q96PB1 KRT43P-201ENST00000434019 910 ntBASIC17.09■□□□□ 0.33
CASD1Q96PB1 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC17.09■□□□□ 0.33
CASD1Q96PB1 BNIP3P42-201ENST00000454982 569 ntBASIC17.09■□□□□ 0.33
CASD1Q96PB1 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CASD1Q96PB1 AC092658.1-201ENST00000505836 891 ntBASIC17.09■□□□□ 0.33
CASD1Q96PB1 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC17.09■□□□□ 0.33
CASD1Q96PB1 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC17.09■□□□□ 0.33
CASD1Q96PB1 BNIP3P29-201ENST00000598302 571 ntBASIC17.09■□□□□ 0.33
CASD1Q96PB1 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.09■□□□□ 0.33
CASD1Q96PB1 AC011447.5-201ENST00000616168 564 ntBASIC17.09■□□□□ 0.33
CASD1Q96PB1 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.09■□□□□ 0.33
CASD1Q96PB1 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC17.09■□□□□ 0.33
CASD1Q96PB1 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC17.09■□□□□ 0.33
CASD1Q96PB1 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CASD1Q96PB1 RERG-209ENST00000546331 1383 ntTSL 2 BASIC17.09■□□□□ 0.33
CASD1Q96PB1 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CASD1Q96PB1 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CASD1Q96PB1 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CASD1Q96PB1 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CASD1Q96PB1 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC17.09■□□□□ 0.33
CASD1Q96PB1 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CASD1Q96PB1 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.09■□□□□ 0.33
CASD1Q96PB1 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CASD1Q96PB1 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CASD1Q96PB1 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC17.09■□□□□ 0.33
CASD1Q96PB1 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CASD1Q96PB1 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CASD1Q96PB1 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CASD1Q96PB1 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CASD1Q96PB1 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.09■□□□□ 0.33
CASD1Q96PB1 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CASD1Q96PB1 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CASD1Q96PB1 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CASD1Q96PB1 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
CASD1Q96PB1 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CASD1Q96PB1 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
CASD1Q96PB1 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CASD1Q96PB1 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.08■□□□□ 0.33
CASD1Q96PB1 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CASD1Q96PB1 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.08■□□□□ 0.33
CASD1Q96PB1 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.08■□□□□ 0.33
CASD1Q96PB1 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.08■□□□□ 0.33
CASD1Q96PB1 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CASD1Q96PB1 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC17.08■□□□□ 0.33
CASD1Q96PB1 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.08■□□□□ 0.33
CASD1Q96PB1 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CASD1Q96PB1 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CASD1Q96PB1 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC17.08■□□□□ 0.32
CASD1Q96PB1 REXO1L6P-201ENST00000603433 1515 ntBASIC17.08■□□□□ 0.32
CASD1Q96PB1 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CASD1Q96PB1 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CASD1Q96PB1 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.08■□□□□ 0.32
CASD1Q96PB1 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CASD1Q96PB1 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CASD1Q96PB1 HAUS4P1-201ENST00000406739 1145 ntBASIC17.08■□□□□ 0.32
CASD1Q96PB1 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CASD1Q96PB1 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CASD1Q96PB1 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC17.08■□□□□ 0.32
CASD1Q96PB1 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CASD1Q96PB1 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CASD1Q96PB1 SLED1-202ENST00000512051 380 ntBASIC17.08■□□□□ 0.32
CASD1Q96PB1 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
CASD1Q96PB1 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC17.08■□□□□ 0.32
CASD1Q96PB1 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC17.08■□□□□ 0.32
CASD1Q96PB1 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC17.08■□□□□ 0.32
CASD1Q96PB1 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
CASD1Q96PB1 TDH-203ENST00000531764 1110 ntBASIC17.08■□□□□ 0.32
CASD1Q96PB1 AC124283.3-201ENST00000570869 594 ntBASIC17.08■□□□□ 0.32
CASD1Q96PB1 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC17.08■□□□□ 0.32
CASD1Q96PB1 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
CASD1Q96PB1 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms