Protein–RNA interactions for Protein: Q96M91

CFAP53, Cilia- and flagella-associated protein 53, humanhuman

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP53Q96M91 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC21.58■■□□□ 1.05
CFAP53Q96M91 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CFAP53Q96M91 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC21.58■■□□□ 1.05
CFAP53Q96M91 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC21.58■■□□□ 1.05
CFAP53Q96M91 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CFAP53Q96M91 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CFAP53Q96M91 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CFAP53Q96M91 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CFAP53Q96M91 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC21.58■■□□□ 1.05
CFAP53Q96M91 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC21.58■■□□□ 1.05
CFAP53Q96M91 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
CFAP53Q96M91 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
CFAP53Q96M91 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CFAP53Q96M91 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
CFAP53Q96M91 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CFAP53Q96M91 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CFAP53Q96M91 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CFAP53Q96M91 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC21.58■■□□□ 1.05
CFAP53Q96M91 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC21.58■■□□□ 1.05
CFAP53Q96M91 INGX-202ENST00000489074 768 ntBASIC21.58■■□□□ 1.05
CFAP53Q96M91 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC21.58■■□□□ 1.05
CFAP53Q96M91 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC21.58■■□□□ 1.05
CFAP53Q96M91 SPCS2P1-201ENST00000561636 679 ntBASIC21.58■■□□□ 1.05
CFAP53Q96M91 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC21.58■■□□□ 1.05
CFAP53Q96M91 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CFAP53Q96M91 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC21.58■■□□□ 1.05
CFAP53Q96M91 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC21.58■■□□□ 1.05
CFAP53Q96M91 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
CFAP53Q96M91 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CFAP53Q96M91 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC21.58■■□□□ 1.04
CFAP53Q96M91 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
CFAP53Q96M91 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CFAP53Q96M91 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC21.58■■□□□ 1.04
CFAP53Q96M91 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC21.58■■□□□ 1.04
CFAP53Q96M91 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
CFAP53Q96M91 AC087499.5-201ENST00000452760 1342 ntBASIC21.57■■□□□ 1.04
CFAP53Q96M91 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CFAP53Q96M91 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
CFAP53Q96M91 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC21.57■■□□□ 1.04
CFAP53Q96M91 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC21.57■■□□□ 1.04
CFAP53Q96M91 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CFAP53Q96M91 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC21.57■■□□□ 1.04
CFAP53Q96M91 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CFAP53Q96M91 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
CFAP53Q96M91 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
CFAP53Q96M91 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CFAP53Q96M91 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC21.57■■□□□ 1.04
CFAP53Q96M91 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CFAP53Q96M91 CENPM-206ENST00000407253 818 ntTSL 2 BASIC21.57■■□□□ 1.04
CFAP53Q96M91 TSSK5P-201ENST00000423978 907 ntBASIC21.57■■□□□ 1.04
CFAP53Q96M91 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC21.57■■□□□ 1.04
CFAP53Q96M91 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC21.57■■□□□ 1.04
CFAP53Q96M91 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC21.57■■□□□ 1.04
CFAP53Q96M91 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC21.57■■□□□ 1.04
CFAP53Q96M91 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC21.57■■□□□ 1.04
CFAP53Q96M91 INO80C-206ENST00000586489 594 ntTSL 3 BASIC21.57■■□□□ 1.04
CFAP53Q96M91 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CFAP53Q96M91 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC21.57■■□□□ 1.04
CFAP53Q96M91 AL096865.1-201ENST00000606796 927 ntBASIC21.57■■□□□ 1.04
CFAP53Q96M91 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CFAP53Q96M91 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CFAP53Q96M91 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
CFAP53Q96M91 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC21.57■■□□□ 1.04
CFAP53Q96M91 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CFAP53Q96M91 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
CFAP53Q96M91 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
CFAP53Q96M91 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CFAP53Q96M91 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CFAP53Q96M91 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CFAP53Q96M91 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC21.56■■□□□ 1.04
CFAP53Q96M91 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC21.56■■□□□ 1.04
CFAP53Q96M91 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CFAP53Q96M91 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CFAP53Q96M91 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC21.56■■□□□ 1.04
CFAP53Q96M91 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC21.56■■□□□ 1.04
CFAP53Q96M91 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CFAP53Q96M91 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CFAP53Q96M91 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CFAP53Q96M91 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC21.56■■□□□ 1.04
CFAP53Q96M91 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CFAP53Q96M91 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CFAP53Q96M91 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CFAP53Q96M91 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC21.56■■□□□ 1.04
CFAP53Q96M91 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC21.56■■□□□ 1.04
CFAP53Q96M91 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CFAP53Q96M91 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CFAP53Q96M91 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CFAP53Q96M91 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC21.56■■□□□ 1.04
CFAP53Q96M91 BCRP1-201ENST00000444246 691 ntBASIC21.56■■□□□ 1.04
CFAP53Q96M91 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC21.56■■□□□ 1.04
CFAP53Q96M91 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC21.56■■□□□ 1.04
CFAP53Q96M91 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CFAP53Q96M91 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC21.56■■□□□ 1.04
CFAP53Q96M91 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC21.56■■□□□ 1.04
CFAP53Q96M91 NAA60-208ENST00000570819 833 ntTSL 2 BASIC21.56■■□□□ 1.04
CFAP53Q96M91 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CFAP53Q96M91 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CFAP53Q96M91 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CFAP53Q96M91 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CFAP53Q96M91 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms