Protein–RNA interactions for Protein: Q96M43

NBPF4, Neuroblastoma breakpoint family member 4, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF4Q96M43 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
NBPF4Q96M43 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC21.1■□□□□ 0.97
NBPF4Q96M43 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NBPF4Q96M43 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NBPF4Q96M43 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NBPF4Q96M43 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NBPF4Q96M43 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NBPF4Q96M43 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC21.09■□□□□ 0.97
NBPF4Q96M43 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NBPF4Q96M43 AR-207ENST00000612010 3896 ntTSL 5 BASIC21.09■□□□□ 0.97
NBPF4Q96M43 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
NBPF4Q96M43 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC21.09■□□□□ 0.97
NBPF4Q96M43 USP40-206ENST00000443711 628 ntTSL 2 BASIC21.09■□□□□ 0.97
NBPF4Q96M43 CTBP2P5-201ENST00000454986 1264 ntBASIC21.09■□□□□ 0.97
NBPF4Q96M43 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC21.09■□□□□ 0.97
NBPF4Q96M43 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC21.09■□□□□ 0.97
NBPF4Q96M43 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC21.09■□□□□ 0.97
NBPF4Q96M43 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
NBPF4Q96M43 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NBPF4Q96M43 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
NBPF4Q96M43 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
NBPF4Q96M43 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NBPF4Q96M43 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NBPF4Q96M43 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NBPF4Q96M43 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NBPF4Q96M43 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NBPF4Q96M43 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
NBPF4Q96M43 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
NBPF4Q96M43 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
NBPF4Q96M43 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
NBPF4Q96M43 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
NBPF4Q96M43 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NBPF4Q96M43 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
NBPF4Q96M43 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC21.08■□□□□ 0.97
NBPF4Q96M43 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NBPF4Q96M43 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NBPF4Q96M43 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NBPF4Q96M43 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
NBPF4Q96M43 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NBPF4Q96M43 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
NBPF4Q96M43 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NBPF4Q96M43 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
NBPF4Q96M43 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC21.08■□□□□ 0.97
NBPF4Q96M43 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC21.08■□□□□ 0.97
NBPF4Q96M43 PHKG1P2-201ENST00000457537 863 ntBASIC21.08■□□□□ 0.97
NBPF4Q96M43 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC21.08■□□□□ 0.97
NBPF4Q96M43 PACS1-203ENST00000524815 628 ntTSL 4 BASIC21.08■□□□□ 0.97
NBPF4Q96M43 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC21.08■□□□□ 0.97
NBPF4Q96M43 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
NBPF4Q96M43 AL583810.1-201ENST00000553344 1045 ntBASIC21.08■□□□□ 0.97
NBPF4Q96M43 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC21.08■□□□□ 0.97
NBPF4Q96M43 MIR4538-201ENST00000581377 78 ntBASIC21.08■□□□□ 0.97
NBPF4Q96M43 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
NBPF4Q96M43 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC21.08■□□□□ 0.96
NBPF4Q96M43 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
NBPF4Q96M43 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
NBPF4Q96M43 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
NBPF4Q96M43 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC21.08■□□□□ 0.96
NBPF4Q96M43 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
NBPF4Q96M43 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
NBPF4Q96M43 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC21.08■□□□□ 0.96
NBPF4Q96M43 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
NBPF4Q96M43 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC21.08■□□□□ 0.96
NBPF4Q96M43 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
NBPF4Q96M43 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
NBPF4Q96M43 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC21.07■□□□□ 0.96
NBPF4Q96M43 VILL-207ENST00000465644 1857 ntTSL 5 BASIC21.07■□□□□ 0.96
NBPF4Q96M43 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
NBPF4Q96M43 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC21.07■□□□□ 0.96
NBPF4Q96M43 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC21.07■□□□□ 0.96
NBPF4Q96M43 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NBPF4Q96M43 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NBPF4Q96M43 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
NBPF4Q96M43 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NBPF4Q96M43 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NBPF4Q96M43 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
NBPF4Q96M43 LBX2-201ENST00000341396 886 ntTSL 3 BASIC21.07■□□□□ 0.96
NBPF4Q96M43 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
NBPF4Q96M43 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
NBPF4Q96M43 KRT43P-201ENST00000434019 910 ntBASIC21.07■□□□□ 0.96
NBPF4Q96M43 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
NBPF4Q96M43 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC21.07■□□□□ 0.96
NBPF4Q96M43 HNRNPUP1-201ENST00000554987 333 ntBASIC21.07■□□□□ 0.96
NBPF4Q96M43 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
NBPF4Q96M43 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NBPF4Q96M43 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
NBPF4Q96M43 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NBPF4Q96M43 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
NBPF4Q96M43 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
NBPF4Q96M43 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC21.07■□□□□ 0.96
NBPF4Q96M43 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
NBPF4Q96M43 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NBPF4Q96M43 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NBPF4Q96M43 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NBPF4Q96M43 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC21.07■□□□□ 0.96
NBPF4Q96M43 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC21.07■□□□□ 0.96
NBPF4Q96M43 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NBPF4Q96M43 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
NBPF4Q96M43 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC21.07■□□□□ 0.96
NBPF4Q96M43 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms