Protein–RNA interactions for Protein: Q96LR5

UBE2E2, Ubiquitin-conjugating enzyme E2 E2, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E2Q96LR5 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
UBE2E2Q96LR5 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
UBE2E2Q96LR5 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
UBE2E2Q96LR5 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
UBE2E2Q96LR5 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
UBE2E2Q96LR5 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
UBE2E2Q96LR5 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
UBE2E2Q96LR5 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
UBE2E2Q96LR5 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
UBE2E2Q96LR5 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
UBE2E2Q96LR5 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
UBE2E2Q96LR5 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC12.54□□□□□ -0.4
UBE2E2Q96LR5 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC12.54□□□□□ -0.4
UBE2E2Q96LR5 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC12.54□□□□□ -0.4
UBE2E2Q96LR5 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
UBE2E2Q96LR5 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
UBE2E2Q96LR5 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
UBE2E2Q96LR5 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
UBE2E2Q96LR5 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
UBE2E2Q96LR5 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
UBE2E2Q96LR5 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
UBE2E2Q96LR5 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC12.54□□□□□ -0.4
UBE2E2Q96LR5 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
UBE2E2Q96LR5 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
UBE2E2Q96LR5 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
UBE2E2Q96LR5 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC12.54□□□□□ -0.4
UBE2E2Q96LR5 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
UBE2E2Q96LR5 INGX-202ENST00000489074 768 ntBASIC12.54□□□□□ -0.4
UBE2E2Q96LR5 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC12.54□□□□□ -0.4
UBE2E2Q96LR5 BANF1P1-201ENST00000553684 263 ntBASIC12.54□□□□□ -0.4
UBE2E2Q96LR5 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
UBE2E2Q96LR5 SPCS2P1-201ENST00000561636 679 ntBASIC12.54□□□□□ -0.4
UBE2E2Q96LR5 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC12.54□□□□□ -0.4
UBE2E2Q96LR5 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC12.54□□□□□ -0.4
UBE2E2Q96LR5 AL390955.2-201ENST00000603032 514 ntBASIC12.54□□□□□ -0.4
UBE2E2Q96LR5 AL133215.2-201ENST00000609242 977 ntBASIC12.54□□□□□ -0.4
UBE2E2Q96LR5 AL390754.1-201ENST00000619088 582 ntBASIC12.54□□□□□ -0.4
UBE2E2Q96LR5 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
UBE2E2Q96LR5 AJ011932.1-201ENST00000621707 465 ntBASIC12.54□□□□□ -0.4
UBE2E2Q96LR5 RAB34-223ENST00000636154 730 ntTSL 2 BASIC12.54□□□□□ -0.4
UBE2E2Q96LR5 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
UBE2E2Q96LR5 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
UBE2E2Q96LR5 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
UBE2E2Q96LR5 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
UBE2E2Q96LR5 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
UBE2E2Q96LR5 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC12.54□□□□□ -0.4
UBE2E2Q96LR5 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
UBE2E2Q96LR5 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC12.54□□□□□ -0.4
UBE2E2Q96LR5 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
UBE2E2Q96LR5 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
UBE2E2Q96LR5 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
UBE2E2Q96LR5 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
UBE2E2Q96LR5 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
UBE2E2Q96LR5 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC12.53□□□□□ -0.4
UBE2E2Q96LR5 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
UBE2E2Q96LR5 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
UBE2E2Q96LR5 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC12.53□□□□□ -0.4
UBE2E2Q96LR5 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
UBE2E2Q96LR5 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
UBE2E2Q96LR5 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UBE2E2Q96LR5 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
UBE2E2Q96LR5 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC12.53□□□□□ -0.4
UBE2E2Q96LR5 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
UBE2E2Q96LR5 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UBE2E2Q96LR5 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UBE2E2Q96LR5 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UBE2E2Q96LR5 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
UBE2E2Q96LR5 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
UBE2E2Q96LR5 HNRNPA1P40-201ENST00000426371 1278 ntBASIC12.53□□□□□ -0.4
UBE2E2Q96LR5 AC092580.3-201ENST00000430932 139 ntBASIC12.53□□□□□ -0.4
UBE2E2Q96LR5 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC12.53□□□□□ -0.4
UBE2E2Q96LR5 SERBP1P3-201ENST00000459980 809 ntBASIC12.53□□□□□ -0.4
UBE2E2Q96LR5 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
UBE2E2Q96LR5 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC12.53□□□□□ -0.4
UBE2E2Q96LR5 CCDC74BP1-201ENST00000508880 1123 ntBASIC12.53□□□□□ -0.4
UBE2E2Q96LR5 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UBE2E2Q96LR5 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC12.53□□□□□ -0.4
UBE2E2Q96LR5 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
UBE2E2Q96LR5 AL079307.3-201ENST00000556114 283 ntBASIC12.53□□□□□ -0.4
UBE2E2Q96LR5 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC12.53□□□□□ -0.4
UBE2E2Q96LR5 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC12.53□□□□□ -0.4
UBE2E2Q96LR5 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC12.53□□□□□ -0.4
UBE2E2Q96LR5 AL138828.2-201ENST00000615812 383 ntBASIC12.53□□□□□ -0.4
UBE2E2Q96LR5 SPDYE12P-201ENST00000618416 771 ntBASIC12.53□□□□□ -0.4
UBE2E2Q96LR5 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
UBE2E2Q96LR5 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UBE2E2Q96LR5 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
UBE2E2Q96LR5 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
UBE2E2Q96LR5 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC12.53□□□□□ -0.4
UBE2E2Q96LR5 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC12.53□□□□□ -0.4
UBE2E2Q96LR5 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC12.53□□□□□ -0.4
UBE2E2Q96LR5 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
UBE2E2Q96LR5 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC12.53□□□□□ -0.4
UBE2E2Q96LR5 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC12.53□□□□□ -0.4
UBE2E2Q96LR5 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC12.53□□□□□ -0.4
UBE2E2Q96LR5 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UBE2E2Q96LR5 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
UBE2E2Q96LR5 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
UBE2E2Q96LR5 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UBE2E2Q96LR5 CA12-203ENST00000422263 2556 ntTSL 2 BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms