Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RPGRQ92834 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RPGRQ92834 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
RPGRQ92834 AL592424.1-201ENST00000563624 1536 ntBASIC19.78■□□□□ 0.76
RPGRQ92834 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
RPGRQ92834 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC19.78■□□□□ 0.76
RPGRQ92834 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RPGRQ92834 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC19.78■□□□□ 0.76
RPGRQ92834 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RPGRQ92834 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC19.78■□□□□ 0.76
RPGRQ92834 RPL28-203ENST00000428193 573 ntTSL 2 BASIC19.78■□□□□ 0.76
RPGRQ92834 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC19.78■□□□□ 0.76
RPGRQ92834 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC19.78■□□□□ 0.76
RPGRQ92834 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC19.78■□□□□ 0.76
RPGRQ92834 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
RPGRQ92834 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC19.78■□□□□ 0.76
RPGRQ92834 AL583810.1-201ENST00000553344 1045 ntBASIC19.78■□□□□ 0.76
RPGRQ92834 RPL28-207ENST00000558815 616 ntTSL 2 BASIC19.78■□□□□ 0.76
RPGRQ92834 AL606495.2-201ENST00000605867 535 ntBASIC19.78■□□□□ 0.76
RPGRQ92834 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
RPGRQ92834 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RPGRQ92834 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC19.78■□□□□ 0.76
RPGRQ92834 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RPGRQ92834 PCDHB18P-201ENST00000524813 2368 ntBASIC19.78■□□□□ 0.76
RPGRQ92834 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RPGRQ92834 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC19.78■□□□□ 0.76
RPGRQ92834 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RPGRQ92834 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RPGRQ92834 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RPGRQ92834 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RPGRQ92834 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
RPGRQ92834 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC19.77■□□□□ 0.76
RPGRQ92834 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
RPGRQ92834 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC19.77■□□□□ 0.76
RPGRQ92834 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RPGRQ92834 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RPGRQ92834 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RPGRQ92834 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RPGRQ92834 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
RPGRQ92834 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RPGRQ92834 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC19.77■□□□□ 0.76
RPGRQ92834 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RPGRQ92834 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC19.77■□□□□ 0.76
RPGRQ92834 AC134915.1-201ENST00000426461 574 ntBASIC19.77■□□□□ 0.76
RPGRQ92834 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RPGRQ92834 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
RPGRQ92834 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC19.77■□□□□ 0.76
RPGRQ92834 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC19.77■□□□□ 0.76
RPGRQ92834 PTP4A1P2-201ENST00000546033 454 ntBASIC19.77■□□□□ 0.76
RPGRQ92834 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC19.77■□□□□ 0.76
RPGRQ92834 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC19.77■□□□□ 0.76
RPGRQ92834 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RPGRQ92834 TECR-220ENST00000600083 1204 ntTSL 2 BASIC19.77■□□□□ 0.76
RPGRQ92834 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RPGRQ92834 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.76
RPGRQ92834 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
RPGRQ92834 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RPGRQ92834 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC19.77■□□□□ 0.76
RPGRQ92834 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC19.77■□□□□ 0.76
RPGRQ92834 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RPGRQ92834 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RPGRQ92834 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
RPGRQ92834 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
RPGRQ92834 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RPGRQ92834 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RPGRQ92834 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RPGRQ92834 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RPGRQ92834 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RPGRQ92834 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RPGRQ92834 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RPGRQ92834 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RPGRQ92834 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
RPGRQ92834 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RPGRQ92834 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RPGRQ92834 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RPGRQ92834 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RPGRQ92834 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RPGRQ92834 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RPGRQ92834 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC19.76■□□□□ 0.75
RPGRQ92834 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RPGRQ92834 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RPGRQ92834 BNIP3P1-202ENST00000550043 1585 ntBASIC19.76■□□□□ 0.75
RPGRQ92834 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
RPGRQ92834 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RPGRQ92834 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
RPGRQ92834 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RPGRQ92834 AC099336.1-201ENST00000417053 1171 ntBASIC19.76■□□□□ 0.75
RPGRQ92834 SOCS2P1-201ENST00000417727 557 ntBASIC19.76■□□□□ 0.75
RPGRQ92834 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC19.76■□□□□ 0.75
RPGRQ92834 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC19.76■□□□□ 0.75
RPGRQ92834 USB1-203ENST00000539737 1212 ntTSL 2 BASIC19.76■□□□□ 0.75
RPGRQ92834 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC19.76■□□□□ 0.75
RPGRQ92834 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC19.76■□□□□ 0.75
RPGRQ92834 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RPGRQ92834 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RPGRQ92834 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC19.76■□□□□ 0.75
RPGRQ92834 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC19.76■□□□□ 0.75
RPGRQ92834 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RPGRQ92834 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
RPGRQ92834 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms